Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.24□□□□□ -1.89
Lire1P11260 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lire1P11260 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lire1P11260 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.24□□□□□ -1.89
Lire1P11260 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lire1P11260 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lire1P11260 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lire1P11260 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lire1P11260 Gm24126-201ENSMUST00000104111 106 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm26473-201ENSMUST00000116763 127 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm14594-201ENSMUST00000118052 537 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm14590-201ENSMUST00000118934 537 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm14363-201ENSMUST00000122304 409 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.23□□□□□ -1.89
Lire1P11260 Gm25979-201ENSMUST00000157177 138 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm24244-201ENSMUST00000157317 130 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm14596-201ENSMUST00000180268 537 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm14595-201ENSMUST00000180335 537 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Mir7578-201ENSMUST00000183455 82 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm28802-201ENSMUST00000188624 944 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm37698-201ENSMUST00000192605 463 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.23□□□□□ -1.89
Lire1P11260 Gm37987-201ENSMUST00000194999 825 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Gm45860-201ENSMUST00000212700 334 ntBASIC3.23□□□□□ -1.89
Lire1P11260 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.23□□□□□ -1.89
Lire1P11260 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lire1P11260 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.23□□□□□ -1.89
Lire1P11260 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lire1P11260 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Lire1P11260 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lire1P11260 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lire1P11260 Gm13650-201ENSMUST00000117729 433 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm14987-201ENSMUST00000117820 676 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm15113-201ENSMUST00000119280 836 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm16005-201ENSMUST00000120515 269 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.22□□□□□ -1.89
Lire1P11260 Gm22890-201ENSMUST00000158642 144 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm3104-201ENSMUST00000171004 473 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm20399-201ENSMUST00000174652 132 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm27527-201ENSMUST00000183903 99 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Mir6993-201ENSMUST00000184912 65 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Mir7062-201ENSMUST00000185038 66 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm38231-201ENSMUST00000192030 347 ntBASIC3.22□□□□□ -1.89
Lire1P11260 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.22□□□□□ -1.89
Lire1P11260 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.22□□□□□ -1.89
Lire1P11260 Gm36776-201ENSMUST00000207006 203 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.22□□□□□ -1.89
Lire1P11260 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.22□□□□□ -1.89
Lire1P11260 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm25007-201ENSMUST00000083808 133 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm25008-201ENSMUST00000083809 81 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.22□□□□□ -1.89
Lire1P11260 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lire1P11260 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
Lire1P11260 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.21□□□□□ -1.89
Lire1P11260 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lire1P11260 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lire1P11260 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm12125-201ENSMUST00000117261 736 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm14843-201ENSMUST00000119596 212 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm14867-201ENSMUST00000120156 866 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm15223-201ENSMUST00000120989 826 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm25283-201ENSMUST00000157272 77 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm25860-201ENSMUST00000158252 126 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm24876-201ENSMUST00000158780 92 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm16101-201ENSMUST00000160695 430 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm3470-201ENSMUST00000160819 420 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm5224-201ENSMUST00000183060 350 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm28755-201ENSMUST00000185773 199 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm17893-201ENSMUST00000203017 770 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm44478-201ENSMUST00000204875 114 ntBASIC3.21□□□□□ -1.9
Lire1P11260 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.21□□□□□ -1.9
Lire1P11260 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.21□□□□□ -1.9
Lire1P11260 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.21□□□□□ -1.9
Lire1P11260 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.21□□□□□ -1.9
Lire1P11260 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm23249-201ENSMUST00000083369 161 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms