Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Hoxd3P09027 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm24116-201ENSMUST00000103975 107 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm23294-201ENSMUST00000104150 164 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm22194-201ENSMUST00000116869 95 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm11456-201ENSMUST00000121070 256 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm25985-201ENSMUST00000122677 107 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm23956-201ENSMUST00000157211 119 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm6872-201ENSMUST00000165001 700 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Mir8106-201ENSMUST00000184520 139 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm18956-201ENSMUST00000192857 480 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm6303-201ENSMUST00000210123 471 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm6462-201ENSMUST00000081488 304 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm25411-201ENSMUST00000083760 151 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.18□□□□□ -1.74
Hoxd3P09027 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Hoxd3P09027 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Hoxd3P09027 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Hoxd3P09027 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Mir1188-201ENSMUST00000116756 120 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm11894-201ENSMUST00000121579 328 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm26414-201ENSMUST00000157674 269 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm7609-204ENSMUST00000161424 461 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm17166-201ENSMUST00000172006 431 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm19427-201ENSMUST00000183619 208 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm4322-201ENSMUST00000191094 336 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm43444-201ENSMUST00000198123 291 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm35702-201ENSMUST00000198653 511 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm43309-201ENSMUST00000200837 458 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.17□□□□□ -1.74
Hoxd3P09027 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Hoxd3P09027 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Hoxd3P09027 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Hoxd3P09027 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd3P09027 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Gm22003-201ENSMUST00000101885 107 ntBASIC4.16□□□□□ -1.74
Hoxd3P09027 Gm11447-201ENSMUST00000118983 858 ntBASIC4.16□□□□□ -1.74
Hoxd3P09027 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.16□□□□□ -1.74
Hoxd3P09027 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms