Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm28090-201ENSMUST00000189458 664 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm21647-201ENSMUST00000189755 664 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm29546-201ENSMUST00000191171 678 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.67□□□□□ -1.82
Col3a1P08121 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm10264-201ENSMUST00000220589 429 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm24254-201ENSMUST00000083702 104 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm25876-201ENSMUST00000104329 119 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm14506-201ENSMUST00000121165 536 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm23352-201ENSMUST00000158428 64 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm20656-201ENSMUST00000176925 518 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Gm27505-201ENSMUST00000185071 110 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Gm44990-201ENSMUST00000203922 217 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col3a1P08121 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col3a1P08121 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Col3a1P08121 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col3a1P08121 Gm23407-201ENSMUST00000082538 91 ntBASIC3.66□□□□□ -1.82
Col3a1P08121 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Col3a1P08121 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.65□□□□□ -1.82
Col3a1P08121 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col3a1P08121 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col3a1P08121 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col3a1P08121 Gm23911-201ENSMUST00000104596 134 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col3a1P08121 Gm15010-201ENSMUST00000117153 407 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm14794-201ENSMUST00000118181 192 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm14574-201ENSMUST00000120644 279 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm14766-201ENSMUST00000121689 367 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm26173-201ENSMUST00000158416 136 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm22434-201ENSMUST00000158549 122 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm5929-201ENSMUST00000166883 487 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.65□□□□□ -1.83
Col3a1P08121 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm21815-201ENSMUST00000178213 664 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm25598-201ENSMUST00000179031 107 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm21893-201ENSMUST00000179119 397 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm19280-201ENSMUST00000190191 205 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm42539-201ENSMUST00000197009 308 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.65□□□□□ -1.83
Col3a1P08121 Gm44431-201ENSMUST00000203500 413 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.65□□□□□ -1.83
Col3a1P08121 Gm45192-201ENSMUST00000206749 283 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.65□□□□□ -1.83
Col3a1P08121 Gm45316-201ENSMUST00000210128 162 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col3a1P08121 Mir184-201ENSMUST00000083662 69 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Snord7-201ENSMUST00000083781 97 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm26108-201ENSMUST00000083973 191 ntBASIC3.65□□□□□ -1.83
Col3a1P08121 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.65□□□□□ -1.83
Col3a1P08121 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col3a1P08121 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.64□□□□□ -1.83
Col3a1P08121 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col3a1P08121 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col3a1P08121 Gm23942-201ENSMUST00000101956 107 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm24273-201ENSMUST00000102332 164 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm23754-201ENSMUST00000157576 63 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm24691-201ENSMUST00000157762 140 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm25434-201ENSMUST00000158278 167 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm22252-201ENSMUST00000179316 79 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col3a1P08121 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm42578-201ENSMUST00000199960 194 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col3a1P08121 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col3a1P08121 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Gm26121-201ENSMUST00000083364 162 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.64□□□□□ -1.83
Col3a1P08121 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col3a1P08121 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col3a1P08121 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms