Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44857-201ENSMUST00000208331 196 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 AC145736.1-201ENSMUST00000214661 479 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
Hmgb3O54879 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm22154-201ENSMUST00000083844 131 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm22444-201ENSMUST00000093693 108 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm13627-201ENSMUST00000119700 706 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm12368-201ENSMUST00000122251 434 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm22083-201ENSMUST00000157586 102 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm24783-201ENSMUST00000157639 100 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm25332-201ENSMUST00000158038 105 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm24314-201ENSMUST00000158274 123 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm6788-201ENSMUST00000166459 270 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm25942-201ENSMUST00000180080 110 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Mir6401-201ENSMUST00000184499 109 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Trbv18-201ENSMUST00000194256 294 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm43541-201ENSMUST00000197208 581 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm44665-201ENSMUST00000205381 251 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm45395-201ENSMUST00000209891 559 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm45288-201ENSMUST00000210236 151 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Hmgb3O54879 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.91□□□□□ -2.1
Hmgb3O54879 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.91□□□□□ -2.1
Hmgb3O54879 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Hmgb3O54879 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm22353-201ENSMUST00000083918 136 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm4017-201ENSMUST00000084813 338 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
Hmgb3O54879 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.91□□□□□ -2.1
Hmgb3O54879 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Hmgb3O54879 Gm43889-201ENSMUST00000203950 3681 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Hmgb3O54879 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm8569-201ENSMUST00000117630 647 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm11708-201ENSMUST00000119530 832 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm8880-201ENSMUST00000121800 454 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm12755-201ENSMUST00000122297 282 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm16510-201ENSMUST00000153501 249 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm25910-201ENSMUST00000157620 140 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm22252-201ENSMUST00000179316 79 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm43550-201ENSMUST00000200597 303 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm43264-201ENSMUST00000202284 325 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm45400-201ENSMUST00000211603 653 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Hmgb3O54879 AC153924.1-201ENSMUST00000220117 312 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm5471-201ENSMUST00000072732 337 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm26439-201ENSMUST00000082592 106 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm22293-201ENSMUST00000083314 109 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Gm25628-201ENSMUST00000084002 105 ntBASIC1.9□□□□□ -2.11
Hmgb3O54879 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm25539-201ENSMUST00000116886 122 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm27161-201ENSMUST00000183960 562 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm18982-201ENSMUST00000198118 529 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm2436-201ENSMUST00000219562 774 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.89□□□□□ -2.11
Hmgb3O54879 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Gnrh1-202ENSMUST00000223929 428 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 AC183096.1-201ENSMUST00000226392 130 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm24661-201ENSMUST00000083205 104 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms