Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm28191-201ENSMUST00000189112 211 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Gm43804-201ENSMUST00000198280 456 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.22□□□□□ -2.05
Sdc4O35988 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm17890-201ENSMUST00000221419 757 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Sdc4O35988 Mir322-201ENSMUST00000083484 95 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Sdc4O35988 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.22□□□□□ -2.05
Sdc4O35988 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Sdc4O35988 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm24098-201ENSMUST00000102075 109 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm25381-201ENSMUST00000102078 109 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm25728-201ENSMUST00000104525 159 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm12697-201ENSMUST00000118008 667 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm15936-201ENSMUST00000118706 460 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm12607-201ENSMUST00000120724 493 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm23167-201ENSMUST00000157155 103 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc4O35988 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm25525-201ENSMUST00000177701 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm26178-201ENSMUST00000177706 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm26465-201ENSMUST00000178517 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm24317-201ENSMUST00000178536 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm25021-201ENSMUST00000179184 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm22995-201ENSMUST00000179670 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm24424-201ENSMUST00000179714 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm24389-201ENSMUST00000179962 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm25672-201ENSMUST00000180111 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm29163-201ENSMUST00000188029 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm28647-201ENSMUST00000188416 197 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm9377-201ENSMUST00000207227 623 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Sdc4O35988 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc4O35988 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Sdc4O35988 Gm23815-201ENSMUST00000083231 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm23520-201ENSMUST00000093736 107 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.21□□□□□ -2.06
Sdc4O35988 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Sdc4O35988 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc4O35988 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm14607-201ENSMUST00000119119 491 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm22083-201ENSMUST00000157586 102 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Mir1927-201ENSMUST00000158579 109 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm23548-201ENSMUST00000158963 106 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm17711-201ENSMUST00000172028 237 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm23053-201ENSMUST00000175136 96 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm20773-201ENSMUST00000178940 681 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc4O35988 Mir7226-201ENSMUST00000184953 60 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.2□□□□□ -2.06
Sdc4O35988 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm25820-202ENSMUST00000197479 128 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Mir7232-201ENSMUST00000197929 74 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm19253-201ENSMUST00000204279 307 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm44212-201ENSMUST00000205016 897 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm2676-201ENSMUST00000207279 606 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm45445-201ENSMUST00000209586 232 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm2544-201ENSMUST00000222702 756 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Gm46389-201ENSMUST00000223199 392 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm24144-201ENSMUST00000082632 111 ntBASIC2.2□□□□□ -2.06
Sdc4O35988 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Sdc4O35988 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Sdc4O35988 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Sdc4O35988 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Sdc4O35988 Mir592-201ENSMUST00000102113 96 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Sdc4O35988 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Sdc4O35988 Gm12001-201ENSMUST00000121727 913 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm16510-201ENSMUST00000153501 249 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.19□□□□□ -2.06
Sdc4O35988 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm18453-201ENSMUST00000208000 626 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm45701-201ENSMUST00000212049 235 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.19□□□□□ -2.06
Sdc4O35988 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Sdc4O35988 Gm5655-201ENSMUST00000221078 901 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms