Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm5967-201ENSMUST00000172723 494 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm29281-201ENSMUST00000188077 381 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm38238-201ENSMUST00000194334 346 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm44817-201ENSMUST00000205416 453 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm22353-201ENSMUST00000083918 136 ntBASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc180J3QNE4 Gm24889-201ENSMUST00000104388 132 ntBASIC3.26□□□□□ -1.89
Ccdc180J3QNE4 Gm26473-201ENSMUST00000116763 127 ntBASIC3.25□□□□□ -1.89
Ccdc180J3QNE4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.25□□□□□ -1.89
Ccdc180J3QNE4 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc180J3QNE4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Ccdc180J3QNE4 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc180J3QNE4 Gm12814-201ENSMUST00000117091 846 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm14882-201ENSMUST00000117216 218 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm24656-201ENSMUST00000177548 132 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm22716-201ENSMUST00000177596 107 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Hmga1b-202ENSMUST00000178955 120 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm27979-201ENSMUST00000185126 56 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.24□□□□□ -1.89
Ccdc180J3QNE4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm42664-201ENSMUST00000199417 3239 ntBASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm11357-201ENSMUST00000119758 954 ntBASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm18433-201ENSMUST00000192747 197 ntBASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm44881-201ENSMUST00000205425 367 ntBASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ccdc180J3QNE4 Gm13231-201ENSMUST00000119218 2850 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Gm26080-201ENSMUST00000104069 131 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Gm23033-201ENSMUST00000157996 134 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.22□□□□□ -1.89
Ccdc180J3QNE4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Ccdc180J3QNE4 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm24783-201ENSMUST00000157639 100 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm25888-201ENSMUST00000157778 302 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm6486-201ENSMUST00000166202 434 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm29167-201ENSMUST00000190024 377 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc180J3QNE4 Gm24174-201ENSMUST00000158933 111 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm46312-201ENSMUST00000220961 420 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm14876-201ENSMUST00000120795 327 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm25831-201ENSMUST00000158924 163 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 AC117232.1-201ENSMUST00000197964 119 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm25402-201ENSMUST00000082966 131 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.2□□□□□ -1.9
Ccdc180J3QNE4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm15183-201ENSMUST00000118933 348 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm9785-202ENSMUST00000144563 593 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm23967-201ENSMUST00000175062 78 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm43431-201ENSMUST00000198577 340 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc180J3QNE4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Gm24757-201ENSMUST00000176987 371 ntBASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Gm43655-201ENSMUST00000197367 222 ntBASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc180J3QNE4 Gm12985-201ENSMUST00000118376 183 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm12495-201ENSMUST00000119750 447 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm12876-201ENSMUST00000120975 408 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms