Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.4□□□□□ -2.02
Chd3B1AR17 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm28744-201ENSMUST00000189939 340 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm43124-201ENSMUST00000201878 278 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm9375-201ENSMUST00000208899 903 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Gm6796-201ENSMUST00000211919 243 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Chd3B1AR17 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Snord104-201ENSMUST00000083192 70 ntBASIC2.4□□□□□ -2.02
Chd3B1AR17 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm12880-201ENSMUST00000120652 494 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm22534-201ENSMUST00000158173 104 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm17065-201ENSMUST00000165245 239 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm27220-201ENSMUST00000183453 262 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Mir6353-201ENSMUST00000183596 113 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm27233-201ENSMUST00000184030 307 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Chd3B1AR17 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm28060-201ENSMUST00000191554 189 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm17893-201ENSMUST00000203017 770 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.4□□□□□ -2.03
Chd3B1AR17 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Chd3B1AR17 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Chd3B1AR17 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm25130-201ENSMUST00000082650 156 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm26176-201ENSMUST00000083795 105 ntBASIC2.4□□□□□ -2.03
Chd3B1AR17 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Chd3B1AR17 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm14623-201ENSMUST00000121398 603 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm22226-201ENSMUST00000157355 109 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm25044-201ENSMUST00000158603 104 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm3104-201ENSMUST00000171004 473 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm28637-201ENSMUST00000179424 345 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm19224-201ENSMUST00000190477 793 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.39□□□□□ -2.03
Chd3B1AR17 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Chd3B1AR17 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm25526-201ENSMUST00000104332 132 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm23167-201ENSMUST00000157155 103 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm23053-201ENSMUST00000175136 96 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm21489-201ENSMUST00000189668 818 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Chd3B1AR17 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.38□□□□□ -2.03
Chd3B1AR17 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr203-201ENSMUST00000089305 924 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Mir682-201ENSMUST00000102281 96 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm9440-201ENSMUST00000119667 539 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm12443-201ENSMUST00000122308 323 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm22561-201ENSMUST00000157331 84 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm26411-201ENSMUST00000157668 107 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm22257-201ENSMUST00000158687 301 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm25971-201ENSMUST00000158953 286 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm19257-201ENSMUST00000186121 183 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm29534-201ENSMUST00000187328 382 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Chd3B1AR17 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm43295-201ENSMUST00000201439 412 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Gm25755-201ENSMUST00000083396 107 ntBASIC2.38□□□□□ -2.03
Chd3B1AR17 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Chd3B1AR17 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Chd3B1AR17 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Chd3B1AR17 Gm23548-201ENSMUST00000158963 106 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Mir7013-201ENSMUST00000183540 72 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Gm38214-201ENSMUST00000192581 988 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Gm42960-201ENSMUST00000202160 241 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Gm45296-201ENSMUST00000209625 205 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Gm45654-201ENSMUST00000210980 123 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.37□□□□□ -2.03
Chd3B1AR17 BC022960-201ENSMUST00000119987 1815 ntBASIC2.37□□□□□ -2.03
Chd3B1AR17 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms