Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm5224-201ENSMUST00000183060 350 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm27893-201ENSMUST00000184408 194 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm1833-201ENSMUST00000191608 682 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm38053-201ENSMUST00000193938 160 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm37495-201ENSMUST00000194590 264 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm43746-201ENSMUST00000200028 317 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm43393-201ENSMUST00000200147 194 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm44157-201ENSMUST00000204720 410 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm29920-201ENSMUST00000206876 754 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm7380-201ENSMUST00000211599 466 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm18729-201ENSMUST00000217230 621 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm2446-201ENSMUST00000220144 772 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm22979-201ENSMUST00000082609 159 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Gm24622-201ENSMUST00000082619 162 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Snora7a-201ENSMUST00000082629 140 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Mir208a-201ENSMUST00000083498 83 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Mir184-201ENSMUST00000083662 69 ntBASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav11A0A0B4J1J9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav11A0A0B4J1J9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm25213-201ENSMUST00000102388 113 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm6923-201ENSMUST00000118343 406 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm13627-201ENSMUST00000119700 706 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm14656-201ENSMUST00000120342 502 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm14599-201ENSMUST00000120469 474 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm14363-201ENSMUST00000122304 409 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm24840-201ENSMUST00000122603 147 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm23704-201ENSMUST00000158844 340 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm3025-201ENSMUST00000163454 489 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm2878-201ENSMUST00000170173 486 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm38149-201ENSMUST00000191943 339 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm45173-201ENSMUST00000206819 305 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm34779-201ENSMUST00000210036 263 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm18252-203ENSMUST00000215855 757 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Snora23-201ENSMUST00000082517 184 ntBASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav11A0A0B4J1J9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm26504-201ENSMUST00000102033 94 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm24126-201ENSMUST00000104111 106 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm14751-201ENSMUST00000117693 222 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm15103-201ENSMUST00000119893 871 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm11384-201ENSMUST00000121376 303 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm13406-201ENSMUST00000121991 256 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm26406-201ENSMUST00000158503 124 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm26195-201ENSMUST00000175035 101 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Mir5099-201ENSMUST00000175257 74 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Mir3066-201ENSMUST00000175296 83 ntBASIC2.01□□□□□ -2.09
Trav11A0A0B4J1J9 Gm26502-201ENSMUST00000177732 94 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms