Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm13555-201ENSMUST00000121668 319 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22839-201ENSMUST00000158436 304 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21842-201ENSMUST00000177552 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21626-201ENSMUST00000177791 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21562-201ENSMUST00000177888 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21539-201ENSMUST00000177925 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17522-201ENSMUST00000178144 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21599-201ENSMUST00000178249 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21914-201ENSMUST00000178452 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21723-201ENSMUST00000178692 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21916-201ENSMUST00000178771 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21801-201ENSMUST00000178865 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21633-201ENSMUST00000178941 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21821-201ENSMUST00000179646 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21588-201ENSMUST00000180074 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21780-201ENSMUST00000180128 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21572-201ENSMUST00000180134 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm21529-201ENSMUST00000180175 498 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Mir6383-201ENSMUST00000184545 116 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29370-202ENSMUST00000187476 499 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29288-201ENSMUST00000191582 901 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm38075-201ENSMUST00000191979 920 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm38231-201ENSMUST00000192030 347 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm44060-201ENSMUST00000204440 410 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm44208-201ENSMUST00000205199 421 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm23691-201ENSMUST00000101878 107 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Mir673-201ENSMUST00000102361 91 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm25308-201ENSMUST00000104171 158 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14579-201ENSMUST00000117068 283 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14669-201ENSMUST00000118841 250 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm12617-201ENSMUST00000121268 381 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm12706-201ENSMUST00000121588 698 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm11819-201ENSMUST00000122192 372 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm24787-201ENSMUST00000157380 123 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm24475-201ENSMUST00000157435 143 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm24138-201ENSMUST00000157572 114 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm26406-201ENSMUST00000158503 124 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm23473-201ENSMUST00000158883 116 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm17183-201ENSMUST00000171170 493 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm5967-201ENSMUST00000172723 494 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm27161-201ENSMUST00000183960 562 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm27428-201ENSMUST00000184289 110 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29330-201ENSMUST00000190032 699 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm28098-201ENSMUST00000191361 699 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm37213-201ENSMUST00000193077 586 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm42958-201ENSMUST00000197595 318 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22507-201ENSMUST00000082773 160 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm25008-201ENSMUST00000083809 81 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trbv1A0A0B4J1G7 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14901-201ENSMUST00000119001 283 ntBASIC2.17□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14989-201ENSMUST00000120497 207 ntBASIC2.17□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14845-201ENSMUST00000121259 306 ntBASIC2.17□□□□□ -2.06
Trbv1A0A0B4J1G7 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms