Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm26041-201ENSMUST00000158148 108 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm25373-201ENSMUST00000158156 115 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm22159-201ENSMUST00000158412 130 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm17072-201ENSMUST00000166673 658 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm23402-201ENSMUST00000178130 107 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm24019-201ENSMUST00000178620 107 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm26243-201ENSMUST00000179260 107 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm24520-201ENSMUST00000179510 110 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm43431-201ENSMUST00000198577 340 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm43405-201ENSMUST00000198642 337 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm32222-201ENSMUST00000203296 298 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm45696-201ENSMUST00000212088 985 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm8942-201ENSMUST00000217892 400 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm46436-201ENSMUST00000221851 1294 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm19786-201ENSMUST00000222589 580 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm23296-201ENSMUST00000082555 107 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm24859-201ENSMUST00000082729 107 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC1.52□□□□□ -2.17
Trav4-2A0A075B638 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm11367-201ENSMUST00000117802 120 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm12137-201ENSMUST00000119565 346 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm14623-201ENSMUST00000121398 603 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm23467-201ENSMUST00000157127 159 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm26345-201ENSMUST00000157534 120 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm27369-201ENSMUST00000185182 71 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm37353-201ENSMUST00000194497 313 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm43587-201ENSMUST00000199590 204 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm29815-201ENSMUST00000202418 178 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm44212-201ENSMUST00000205016 897 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm44520-201ENSMUST00000205447 802 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.51□□□□□ -2.17
Trav4-2A0A075B638 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm8569-201ENSMUST00000117630 647 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm16383-201ENSMUST00000118122 232 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm16458-201ENSMUST00000121428 502 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm24478-201ENSMUST00000157439 158 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm9892-201ENSMUST00000182415 992 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm27999-201ENSMUST00000183539 193 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm28647-201ENSMUST00000188416 197 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm10925-201ENSMUST00000189941 678 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm28169-201ENSMUST00000190342 345 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm19224-201ENSMUST00000190477 793 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Mir7021-201ENSMUST00000197026 63 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm45551-201ENSMUST00000211459 928 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 AC159246.1-201ENSMUST00000214478 249 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm46194-201ENSMUST00000218136 320 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm19540-201ENSMUST00000221843 810 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm7214-201ENSMUST00000222428 272 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 AC164883.9-201ENSMUST00000228042 399 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm24165-201ENSMUST00000082718 128 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm22507-201ENSMUST00000082773 160 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm25856-201ENSMUST00000082786 75 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trav4-2A0A075B638 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trav4-2A0A075B638 Gm15159-201ENSMUST00000117062 764 ntBASIC1.49□□□□□ -2.17
Trav4-2A0A075B638 Gm15120-201ENSMUST00000120602 301 ntBASIC1.49□□□□□ -2.17
Trav4-2A0A075B638 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trav4-2A0A075B638 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Trav4-2A0A075B638 Gm28900-201ENSMUST00000185232 156 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms