Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm12814-201ENSMUST00000117091 846 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm11352-201ENSMUST00000119264 517 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm14119-201ENSMUST00000119511 235 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm13239-201ENSMUST00000119920 637 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm12706-201ENSMUST00000121588 698 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm26701-201ENSMUST00000181571 234 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Mir7j-201ENSMUST00000184427 122 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Npn2-202ENSMUST00000189275 235 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm37727-201ENSMUST00000191637 819 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm43393-201ENSMUST00000200147 194 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm25203-202ENSMUST00000200458 216 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm44076-201ENSMUST00000203072 520 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm18488-201ENSMUST00000215082 364 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm25203-201ENSMUST00000082842 215 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm22590-201ENSMUST00000104247 128 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm11576-201ENSMUST00000117433 417 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm6923-201ENSMUST00000118343 406 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm11429-201ENSMUST00000119089 144 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm12458-201ENSMUST00000119387 495 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm14008-201ENSMUST00000120483 274 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm26348-201ENSMUST00000157528 240 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm24190-201ENSMUST00000157976 216 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm24730-201ENSMUST00000158228 117 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm25194-201ENSMUST00000177987 79 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm27783-201ENSMUST00000183534 105 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm27477-201ENSMUST00000184649 143 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm27700-201ENSMUST00000185003 81 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm1833-201ENSMUST00000191608 682 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm5551-201ENSMUST00000199720 690 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm36776-201ENSMUST00000207006 203 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm45614-201ENSMUST00000209994 721 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm26129-201ENSMUST00000082719 107 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 BC051076-202ENSMUST00000199477 2868 ntBASIC2.79□□□□□ -1.96
Trav1A0A075B5Z4 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm12515-201ENSMUST00000120116 361 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm25977-201ENSMUST00000158697 85 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm26585-201ENSMUST00000180890 630 ntBASIC2.78□□□□□ -1.96
Trav1A0A075B5Z4 Gm27535-201ENSMUST00000183814 157 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms