Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24890-201ENSMUST00000104389 102 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm23755-201ENSMUST00000157578 343 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm25667-201ENSMUST00000157701 275 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm22076-201ENSMUST00000158601 84 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm26866-201ENSMUST00000180414 802 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm28148-201ENSMUST00000186924 697 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm19177-201ENSMUST00000204520 613 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm44720-201ENSMUST00000206076 260 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm45273-201ENSMUST00000211559 281 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm18160-201ENSMUST00000214279 827 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm4036-201ENSMUST00000220842 626 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm18116-201ENSMUST00000220920 537 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm24610-201ENSMUST00000083270 109 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm24611-201ENSMUST00000083272 107 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb1S4R1E0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm24831-201ENSMUST00000116778 126 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm14811-201ENSMUST00000117070 117 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm15266-201ENSMUST00000119635 255 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm15030-201ENSMUST00000119804 484 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm11829-201ENSMUST00000121003 282 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm23429-201ENSMUST00000122486 149 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm25559-201ENSMUST00000157182 74 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm23671-201ENSMUST00000157472 103 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm23084-201ENSMUST00000157850 114 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm26652-202ENSMUST00000181672 475 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm26960-201ENSMUST00000182263 412 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm7909-201ENSMUST00000182688 614 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm28802-201ENSMUST00000188624 944 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm44355-201ENSMUST00000200417 104 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm43039-201ENSMUST00000202883 963 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm45173-201ENSMUST00000206819 305 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm3442-201ENSMUST00000216808 710 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm2446-201ENSMUST00000220144 772 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.03□□□□□ -1.92
H2afb1S4R1E0 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Mir690-201ENSMUST00000102110 109 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm24987-201ENSMUST00000104453 134 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm14518-201ENSMUST00000117351 542 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm13082-201ENSMUST00000118877 561 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm15026-201ENSMUST00000119219 458 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm12335-201ENSMUST00000119738 327 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm13239-201ENSMUST00000119920 637 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm15038-201ENSMUST00000122144 296 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm26348-201ENSMUST00000157528 240 ntBASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb1S4R1E0 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms