Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.38□□□□□ -1.55
Prpf40aQ9R1C7 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm13329-201ENSMUST00000117063 265 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm3267-201ENSMUST00000118671 473 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm11631-201ENSMUST00000119220 156 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm22343-201ENSMUST00000122648 286 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm5777-201ENSMUST00000177265 448 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm9379-201ENSMUST00000196790 646 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm45513-201ENSMUST00000210228 376 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 AC133598.3-201ENSMUST00000224322 568 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm25202-201ENSMUST00000082838 191 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Gm45557-201ENSMUST00000210004 1651 ntBASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Prpf40aQ9R1C7 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm21035-201ENSMUST00000207867 2608 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm12423-201ENSMUST00000118334 135 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm15760-201ENSMUST00000119553 283 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm14619-201ENSMUST00000120480 168 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm25283-201ENSMUST00000157272 77 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm23534-201ENSMUST00000157539 97 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm24690-201ENSMUST00000157759 97 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm4617-201ENSMUST00000178993 331 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm27551-201ENSMUST00000184258 77 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm28921-201ENSMUST00000190219 378 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm37878-201ENSMUST00000192108 387 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm42830-201ENSMUST00000196642 313 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm8274-201ENSMUST00000219820 463 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm7040-201ENSMUST00000223271 443 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Mir338-201ENSMUST00000083666 98 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.36□□□□□ -1.55
Prpf40aQ9R1C7 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm15012-201ENSMUST00000119176 106 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm11584-201ENSMUST00000120636 325 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm22113-201ENSMUST00000158343 104 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29320-201ENSMUST00000185235 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28339-201ENSMUST00000185845 696 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28471-201ENSMUST00000185994 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29179-202ENSMUST00000186138 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28598-201ENSMUST00000186490 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28057-201ENSMUST00000186603 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29448-201ENSMUST00000186675 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29314-201ENSMUST00000186800 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29429-201ENSMUST00000187071 121 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28253-202ENSMUST00000187971 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28896-201ENSMUST00000188609 696 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm20257-202ENSMUST00000188643 130 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29268-201ENSMUST00000188669 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm29169-201ENSMUST00000189835 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm28978-201ENSMUST00000191120 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm37172-201ENSMUST00000191926 615 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm20056-201ENSMUST00000194813 519 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms