Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm4017-201ENSMUST00000084813 338 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm24670-201ENSMUST00000104154 132 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm13046-201ENSMUST00000117391 501 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm6574-201ENSMUST00000120037 362 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm26005-201ENSMUST00000158802 134 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Mir5099-201ENSMUST00000175257 74 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm37037-201ENSMUST00000194475 424 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm43930-201ENSMUST00000203868 845 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm4945-201ENSMUST00000075152 453 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm26494-201ENSMUST00000083154 143 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Mir323-201ENSMUST00000083683 86 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm24493-201ENSMUST00000083805 143 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem3Q9JKE1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.92□□□□□ -2.1
Trem3Q9JKE1 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Mir682-201ENSMUST00000102281 96 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm14751-201ENSMUST00000117693 222 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm14652-201ENSMUST00000118479 235 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm26027-201ENSMUST00000122725 268 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm22390-201ENSMUST00000157588 325 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm23588-201ENSMUST00000157659 99 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Mir1927-201ENSMUST00000158579 109 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm25490-201ENSMUST00000158734 130 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm23476-201ENSMUST00000158881 274 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm24875-201ENSMUST00000158888 104 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm9587-201ENSMUST00000172449 454 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm20915-201ENSMUST00000191575 663 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm37708-201ENSMUST00000192337 895 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm37676-201ENSMUST00000195496 507 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm43096-201ENSMUST00000196173 421 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Mir3069-201ENSMUST00000198802 65 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm44526-201ENSMUST00000204664 121 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.91□□□□□ -2.1
Trem3Q9JKE1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 AC164883.9-201ENSMUST00000228042 399 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trem3Q9JKE1 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm24313-201ENSMUST00000082561 133 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm22444-201ENSMUST00000093693 108 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Gm43663-201ENSMUST00000198643 1505 ntBASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trem3Q9JKE1 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Trem3Q9JKE1 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Trem3Q9JKE1 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm26280-201ENSMUST00000157096 101 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm23865-201ENSMUST00000157723 97 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm27379-201ENSMUST00000183730 123 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Mir6926-201ENSMUST00000184562 68 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm19193-201ENSMUST00000190263 590 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm29747-201ENSMUST00000194764 585 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm43407-201ENSMUST00000199816 317 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm45023-201ENSMUST00000207951 379 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.9□□□□□ -2.11
Trem3Q9JKE1 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trem3Q9JKE1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.89□□□□□ -2.11
Trem3Q9JKE1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trem3Q9JKE1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Trem3Q9JKE1 Mir466k-201ENSMUST00000116774 122 ntBASIC1.89□□□□□ -2.11
Trem3Q9JKE1 Gm2288-201ENSMUST00000118560 638 ntBASIC1.89□□□□□ -2.11
Trem3Q9JKE1 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms