Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm24376-201ENSMUST00000104399 127 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm14825-201ENSMUST00000113538 701 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm11813-201ENSMUST00000118586 291 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm14366-201ENSMUST00000121970 730 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm22199-201ENSMUST00000122660 126 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm22988-201ENSMUST00000122759 144 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm22561-201ENSMUST00000157331 84 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm23591-201ENSMUST00000157663 286 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Mir7578-201ENSMUST00000183455 82 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Mir6715-201ENSMUST00000184990 57 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm29740-201ENSMUST00000193182 655 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm37431-201ENSMUST00000195102 111 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm43651-201ENSMUST00000199796 439 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 AC162857.1-201ENSMUST00000226614 400 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.88□□□□□ -1.79
Trim54Q9ERP3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm11876-201ENSMUST00000120002 269 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm15077-201ENSMUST00000122344 362 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm22890-201ENSMUST00000158642 144 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm4076-201ENSMUST00000179230 965 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm23860-201ENSMUST00000179446 132 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm27539-201ENSMUST00000184971 224 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm9236-201ENSMUST00000196892 587 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm43804-201ENSMUST00000198280 456 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.87□□□□□ -1.79
Trim54Q9ERP3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm14537-201ENSMUST00000117464 599 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm11923-201ENSMUST00000118135 508 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm11693-201ENSMUST00000119625 565 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms