Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm43659-201ENSMUST00000200894 628 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm45023-201ENSMUST00000207951 379 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm20948-201ENSMUST00000211091 449 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm23939-201ENSMUST00000082880 133 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.67□□□□□ -1.98
Cdc40Q9DC48 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Mir1195-201ENSMUST00000116818 98 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm13731-201ENSMUST00000117332 196 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm14463-201ENSMUST00000121117 498 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm22960-201ENSMUST00000122517 104 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm23213-201ENSMUST00000122715 313 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm25807-201ENSMUST00000122783 305 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm24691-201ENSMUST00000157762 140 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm26214-201ENSMUST00000158581 107 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm17186-201ENSMUST00000171742 456 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm44332-201ENSMUST00000203712 433 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm44634-201ENSMUST00000206119 152 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cdc40Q9DC48 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Cdc40Q9DC48 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.65□□□□□ -1.98
Cdc40Q9DC48 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Cdc40Q9DC48 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm16431-201ENSMUST00000117454 431 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm14159-201ENSMUST00000119832 451 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm11471-201ENSMUST00000121824 198 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm26277-201ENSMUST00000157097 152 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm26349-201ENSMUST00000157530 130 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm24080-201ENSMUST00000175178 232 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm8649-201ENSMUST00000181799 233 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm1833-201ENSMUST00000191608 682 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm18268-201ENSMUST00000208445 943 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm26203-201ENSMUST00000082911 114 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Mir21a-201ENSMUST00000083521 92 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.65□□□□□ -1.99
Cdc40Q9DC48 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm15159-201ENSMUST00000117062 764 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm3788-201ENSMUST00000119949 136 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm22849-201ENSMUST00000157713 307 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm24532-201ENSMUST00000157951 286 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm22307-201ENSMUST00000180019 107 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm27161-201ENSMUST00000183960 562 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Mir6405-201ENSMUST00000184584 124 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm27505-201ENSMUST00000185071 110 ntBASIC2.64□□□□□ -1.99
Cdc40Q9DC48 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms