Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm18645-201ENSMUST00000209593 651 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 Gm19563-201ENSMUST00000222031 270 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 Gm23850-201ENSMUST00000083830 169 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 Mir465-201ENSMUST00000093563 74 ntBASIC3.45□□□□□ -1.86
Ccdc39Q9D5Y1 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm3940-201ENSMUST00000105087 432 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm12137-201ENSMUST00000119565 346 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm11693-201ENSMUST00000119625 565 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm9001-201ENSMUST00000121642 399 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm13194-201ENSMUST00000142299 311 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm24198-201ENSMUST00000157812 108 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm22766-201ENSMUST00000158372 99 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm16236-201ENSMUST00000159588 379 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm2930-201ENSMUST00000170403 474 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm27755-201ENSMUST00000184623 132 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm28384-201ENSMUST00000189079 463 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm43142-201ENSMUST00000198670 361 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm43659-201ENSMUST00000200894 628 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm9973-202ENSMUST00000220926 166 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm10088-201ENSMUST00000074116 423 ntBASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc39Q9D5Y1 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Mir667-201ENSMUST00000102441 92 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm12636-201ENSMUST00000117395 624 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm11321-201ENSMUST00000121257 902 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm22026-201ENSMUST00000122735 281 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm15878-201ENSMUST00000127561 306 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm26215-201ENSMUST00000158584 139 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm27796-201ENSMUST00000183863 261 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm37417-201ENSMUST00000195257 454 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm44727-201ENSMUST00000204225 451 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm18410-201ENSMUST00000207199 577 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm24928-201ENSMUST00000083399 107 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm25897-201ENSMUST00000083709 107 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ccdc39Q9D5Y1 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Mir499-201ENSMUST00000102357 79 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm23911-201ENSMUST00000104596 134 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm2348-201ENSMUST00000108782 300 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm25509-201ENSMUST00000116985 106 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm8260-201ENSMUST00000119230 353 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm14600-201ENSMUST00000121032 630 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm25413-201ENSMUST00000158544 312 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm17377-201ENSMUST00000165184 207 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm7346-201ENSMUST00000169661 476 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm27964-201ENSMUST00000185195 62 ntBASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc39Q9D5Y1 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms