Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm6071-201ENSMUST00000119561 440 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm15142-201ENSMUST00000121013 856 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm13356-201ENSMUST00000121678 335 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm13406-201ENSMUST00000121991 256 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm8840-201ENSMUST00000122454 386 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm22957-201ENSMUST00000122511 123 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm22766-201ENSMUST00000158372 99 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm25835-201ENSMUST00000158917 144 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm3111-201ENSMUST00000167426 490 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Mir6338-201ENSMUST00000183389 109 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm28030-201ENSMUST00000184987 138 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm29263-201ENSMUST00000188718 463 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm37097-201ENSMUST00000193676 336 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm5265-201ENSMUST00000076828 342 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm24035-201ENSMUST00000082867 107 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm25755-201ENSMUST00000083396 107 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm10242-201ENSMUST00000090064 330 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm12722-201ENSMUST00000118507 493 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm14428-201ENSMUST00000120408 822 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm12045-201ENSMUST00000122122 573 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm25519-201ENSMUST00000158392 127 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm24552-201ENSMUST00000158646 103 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm22584-201ENSMUST00000177935 92 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm23619-201ENSMUST00000178411 94 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm25474-201ENSMUST00000179052 94 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm22047-201ENSMUST00000179176 94 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Mir7658-201ENSMUST00000184043 57 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm37866-201ENSMUST00000191950 696 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm18692-201ENSMUST00000193047 511 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm44391-201ENSMUST00000198490 93 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm43198-201ENSMUST00000200927 326 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm34701-202ENSMUST00000204685 360 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm44927-201ENSMUST00000207573 716 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm45420-201ENSMUST00000211243 425 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm26055-201ENSMUST00000083038 107 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm10161-201ENSMUST00000091506 204 ntBASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Vps28Q9D1C8 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm24987-201ENSMUST00000104453 134 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm12814-201ENSMUST00000117091 846 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm14119-201ENSMUST00000119511 235 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm11876-201ENSMUST00000120002 269 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm14687-201ENSMUST00000120206 363 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm12858-201ENSMUST00000121913 208 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm22792-201ENSMUST00000157225 133 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm22733-201ENSMUST00000158094 91 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm25438-201ENSMUST00000158281 110 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm23583-201ENSMUST00000158533 289 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm28283-201ENSMUST00000185509 178 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm36984-201ENSMUST00000192770 235 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm19147-201ENSMUST00000199622 652 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm45590-201ENSMUST00000209715 262 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms