Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm22398-201ENSMUST00000174941 125 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm25731-201ENSMUST00000175167 125 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Mir5134-201ENSMUST00000175529 78 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm22395-201ENSMUST00000177427 96 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Mir6986-201ENSMUST00000184483 58 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm27611-201ENSMUST00000184690 108 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm27490-201ENSMUST00000184754 128 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm27608-201ENSMUST00000184822 162 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm9227-201ENSMUST00000194733 566 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm7039-201ENSMUST00000205138 346 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm45006-201ENSMUST00000206078 690 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 AC069561.2-201ENSMUST00000217596 420 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm10343-201ENSMUST00000096279 348 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.22□□□□□ -1.73
Ddx56Q9D0R4 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.21□□□□□ -1.73
Ddx56Q9D0R4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ddx56Q9D0R4 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ddx56Q9D0R4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ddx56Q9D0R4 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm13314-201ENSMUST00000118742 335 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm14562-201ENSMUST00000129885 543 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm22038-201ENSMUST00000157277 242 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm23332-201ENSMUST00000157424 275 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm19193-201ENSMUST00000190263 590 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm29704-201ENSMUST00000196011 253 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm43955-201ENSMUST00000204332 142 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm45209-201ENSMUST00000207122 353 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm25853-201ENSMUST00000082793 132 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm24045-201ENSMUST00000083113 98 ntBASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx56Q9D0R4 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm15994-201ENSMUST00000118029 402 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm15899-201ENSMUST00000128586 238 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm23554-201ENSMUST00000157818 110 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm22211-201ENSMUST00000158097 156 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Mir5101-201ENSMUST00000175181 83 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm24264-201ENSMUST00000179835 94 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm29429-201ENSMUST00000187071 121 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm36953-201ENSMUST00000195295 268 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm44354-201ENSMUST00000196017 143 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm9238-201ENSMUST00000196181 329 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Gm25581-201ENSMUST00000083410 164 ntBASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ddx56Q9D0R4 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm16250-201ENSMUST00000148974 256 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms