Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm25586-201ENSMUST00000082499 112 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm25592-201ENSMUST00000082635 131 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm23503-201ENSMUST00000083903 107 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm11813-201ENSMUST00000118586 291 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm15268-201ENSMUST00000118845 352 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm15266-201ENSMUST00000119635 255 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm13406-201ENSMUST00000121991 256 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm15147-201ENSMUST00000122263 483 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm24438-201ENSMUST00000157893 115 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm25670-201ENSMUST00000178423 107 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm26239-201ENSMUST00000178842 107 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm24267-201ENSMUST00000179841 107 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm18185-201ENSMUST00000186725 667 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm29704-201ENSMUST00000196011 253 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm7946-201ENSMUST00000203326 958 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm45590-201ENSMUST00000209715 262 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm18160-201ENSMUST00000214279 827 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm46994-201ENSMUST00000221523 219 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm24292-201ENSMUST00000082888 107 ntBASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ddx28Q9CWT6 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm23532-201ENSMUST00000104569 112 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm14785-201ENSMUST00000120185 539 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm23540-201ENSMUST00000157543 164 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Nron-204ENSMUST00000158971 370 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm4761-201ENSMUST00000178086 582 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm26652-202ENSMUST00000181672 475 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm37698-201ENSMUST00000192605 463 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm37617-201ENSMUST00000194309 159 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm17781-201ENSMUST00000195232 649 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm5955-201ENSMUST00000222712 219 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm22245-201ENSMUST00000082479 103 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm25205-201ENSMUST00000082841 103 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.25□□□□□ -1.89
Ddx28Q9CWT6 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm23744-201ENSMUST00000104231 149 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm25773-201ENSMUST00000116718 127 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm14751-201ENSMUST00000117693 222 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm12954-201ENSMUST00000118610 611 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm12825-201ENSMUST00000120249 563 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm13511-201ENSMUST00000121167 363 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm12578-201ENSMUST00000121244 417 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm6079-201ENSMUST00000121356 404 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm12770-201ENSMUST00000121734 462 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 252.4 ms