Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm38149-201ENSMUST00000191943 339 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm18551-201ENSMUST00000195594 642 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm7675-201ENSMUST00000208828 686 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm45344-201ENSMUST00000211610 341 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm19540-201ENSMUST00000221843 810 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm26423-201ENSMUST00000104277 128 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm3940-201ENSMUST00000105087 432 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm13502-201ENSMUST00000121574 684 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm25807-201ENSMUST00000122783 305 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm23402-201ENSMUST00000178130 107 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm26960-201ENSMUST00000182263 412 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm27342-201ENSMUST00000183530 109 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm27599-201ENSMUST00000183758 174 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm28650-201ENSMUST00000188413 411 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm35570-201ENSMUST00000198730 681 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm43899-201ENSMUST00000203675 246 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Smc1aQ9CU62 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm7974-201ENSMUST00000117154 408 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm9850-201ENSMUST00000117916 227 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm15466-201ENSMUST00000122299 333 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm24720-201ENSMUST00000157518 166 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm22538-201ENSMUST00000158169 299 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm17061-201ENSMUST00000163167 499 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm27893-201ENSMUST00000184408 194 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Mir6916-201ENSMUST00000184514 63 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm18667-201ENSMUST00000186523 484 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm28534-201ENSMUST00000187744 676 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm28358-202ENSMUST00000189292 223 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm42665-201ENSMUST00000202100 586 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm44223-201ENSMUST00000204854 114 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm44520-201ENSMUST00000205447 802 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm45614-201ENSMUST00000209994 721 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm25856-201ENSMUST00000082786 75 ntBASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Smc1aQ9CU62 Gm15399-201ENSMUST00000118055 724 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm14469-201ENSMUST00000118363 202 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm14804-201ENSMUST00000122322 508 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm25109-201ENSMUST00000122474 114 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm23754-201ENSMUST00000157576 63 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm22186-201ENSMUST00000157822 122 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm28688-201ENSMUST00000187301 268 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm43070-201ENSMUST00000196938 415 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm22154-201ENSMUST00000083844 131 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm24817-201ENSMUST00000093672 105 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms