Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.2□□□□□ -2.06
RTRAFQ9CQE8 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm22676-201ENSMUST00000116972 129 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm13803-201ENSMUST00000117547 489 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm15106-201ENSMUST00000119691 821 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm26020-201ENSMUST00000122729 183 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm23754-201ENSMUST00000157576 63 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm22187-201ENSMUST00000157819 129 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm24532-201ENSMUST00000157951 286 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm24730-201ENSMUST00000158228 117 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm23473-201ENSMUST00000158883 116 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm20450-201ENSMUST00000173652 147 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm24082-201ENSMUST00000175175 83 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Snord93-201ENSMUST00000175580 71 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm18667-201ENSMUST00000186523 484 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm6060-201ENSMUST00000188671 251 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm29330-201ENSMUST00000190032 699 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm28098-201ENSMUST00000191361 699 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm37495-201ENSMUST00000194590 264 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm43070-201ENSMUST00000196938 415 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm43930-201ENSMUST00000203868 845 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm44615-201ENSMUST00000206548 358 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm44954-201ENSMUST00000208513 227 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm45614-201ENSMUST00000209994 721 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RTRAFQ9CQE8 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm7974-201ENSMUST00000117154 408 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm13046-201ENSMUST00000117391 501 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm12427-201ENSMUST00000117719 302 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm14506-201ENSMUST00000121165 536 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm23326-201ENSMUST00000157419 105 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm24534-201ENSMUST00000157949 291 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm27834-201ENSMUST00000183427 125 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm27161-201ENSMUST00000183960 562 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm27470-201ENSMUST00000184070 210 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm38149-201ENSMUST00000191943 339 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm36943-201ENSMUST00000194422 282 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm7624-201ENSMUST00000209702 435 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm2059-201ENSMUST00000212025 287 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm35558-202ENSMUST00000221819 499 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm25147-201ENSMUST00000083030 105 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm25199-201ENSMUST00000083095 104 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Snord104-201ENSMUST00000083192 70 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm23096-201ENSMUST00000083447 107 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Mir421-201ENSMUST00000083575 76 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.18□□□□□ -2.06
RTRAFQ9CQE8 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.17□□□□□ -2.06
RTRAFQ9CQE8 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.17□□□□□ -2.06
RTRAFQ9CQE8 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RTRAFQ9CQE8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RTRAFQ9CQE8 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.17□□□□□ -2.06
RTRAFQ9CQE8 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms