Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm6923-201ENSMUST00000118343 406 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm14119-201ENSMUST00000119511 235 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm11321-201ENSMUST00000121257 902 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm20672-201ENSMUST00000176605 261 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm22108-201ENSMUST00000177961 106 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm24798-201ENSMUST00000179334 106 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm27580-201ENSMUST00000183666 149 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm19620-201ENSMUST00000195972 434 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm42465-201ENSMUST00000197036 492 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm45380-201ENSMUST00000210465 315 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm9845-201ENSMUST00000056409 598 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm26129-201ENSMUST00000082719 107 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup88Q8CEC0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm24430-201ENSMUST00000104077 104 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm11576-201ENSMUST00000117433 417 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm7308-201ENSMUST00000121087 447 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm26173-201ENSMUST00000158416 136 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm24811-201ENSMUST00000175313 100 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm23415-201ENSMUST00000175519 83 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm26866-201ENSMUST00000180414 802 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Mir7k-201ENSMUST00000184115 110 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm31230-201ENSMUST00000199725 785 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm44703-201ENSMUST00000205724 248 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm44594-201ENSMUST00000208982 407 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Gm23733-201ENSMUST00000083750 106 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Nup88Q8CEC0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm23747-201ENSMUST00000104228 131 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm25539-201ENSMUST00000116886 122 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm24836-201ENSMUST00000122609 108 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm4761-201ENSMUST00000178086 582 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm7870-201ENSMUST00000184467 616 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm28802-201ENSMUST00000188624 944 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm29516-201ENSMUST00000190402 468 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm43224-201ENSMUST00000201567 898 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm19244-201ENSMUST00000204340 253 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup88Q8CEC0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.69□□□□□ -1.82
Nup88Q8CEC0 Mir693-201ENSMUST00000102187 89 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms