Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm28412-201ENSMUST00000187243 177 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Gm43991-201ENSMUST00000203751 274 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Ccdc38Q8CDN8 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm22590-201ENSMUST00000104247 128 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm16171-201ENSMUST00000118004 324 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm14358-201ENSMUST00000118458 403 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm13627-201ENSMUST00000119700 706 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm12723-201ENSMUST00000120700 451 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm22956-201ENSMUST00000122520 80 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Mir6353-201ENSMUST00000183596 113 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm27796-201ENSMUST00000183863 261 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm37213-201ENSMUST00000193077 586 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm43746-201ENSMUST00000200028 317 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm36776-201ENSMUST00000207006 203 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm18252-203ENSMUST00000215855 757 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm46233-201ENSMUST00000217831 449 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm31849-201ENSMUST00000220306 375 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc38Q8CDN8 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm15988-201ENSMUST00000118677 367 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm22143-201ENSMUST00000157401 203 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm21893-201ENSMUST00000179119 397 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm26297-201ENSMUST00000179464 132 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm29259-201ENSMUST00000186396 694 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm37866-201ENSMUST00000191950 696 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm44157-201ENSMUST00000204720 410 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm29754-201ENSMUST00000206269 358 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm7751-201ENSMUST00000212868 709 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm46136-201ENSMUST00000214730 565 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Gm9845-201ENSMUST00000056409 598 ntBASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc38Q8CDN8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ccdc38Q8CDN8 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Ccdc38Q8CDN8 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm11576-201ENSMUST00000117433 417 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm15110-201ENSMUST00000117545 881 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm14713-201ENSMUST00000122362 686 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm23887-201ENSMUST00000122683 172 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm23213-201ENSMUST00000122715 313 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm24240-201ENSMUST00000157785 135 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm22187-201ENSMUST00000157819 129 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm23777-201ENSMUST00000158994 259 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Mir5136-201ENSMUST00000175573 76 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Mir5123-201ENSMUST00000177794 83 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm25873-201ENSMUST00000180317 107 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Mir6408-201ENSMUST00000183643 91 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm27676-201ENSMUST00000183669 61 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm43932-201ENSMUST00000204499 52 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 Gm9973-202ENSMUST00000220926 166 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.33□□□□□ -1.88
Ccdc38Q8CDN8 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms