Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm27588-201ENSMUST00000185096 263 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm21673-201ENSMUST00000186640 436 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm21135-201ENSMUST00000189023 436 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm19193-201ENSMUST00000190263 590 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm28500-201ENSMUST00000190286 151 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm37239-201ENSMUST00000193510 141 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm9845-201ENSMUST00000056409 598 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm12335-201ENSMUST00000119738 327 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm13687-201ENSMUST00000119857 282 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm14364-201ENSMUST00000129209 267 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm22836-201ENSMUST00000158441 61 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm4222-201ENSMUST00000165784 470 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Mir5129-201ENSMUST00000174938 78 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm20673-201ENSMUST00000177167 430 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm5368-201ENSMUST00000189012 589 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm37343-201ENSMUST00000192542 111 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm26449-201ENSMUST00000082452 104 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm25853-201ENSMUST00000082793 132 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubfd1Q78JW9 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm15613-201ENSMUST00000118396 326 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm11600-201ENSMUST00000119592 240 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm13339-201ENSMUST00000120651 510 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm8880-201ENSMUST00000121800 454 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm22036-201ENSMUST00000157279 215 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm22219-201ENSMUST00000157562 319 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm24014-201ENSMUST00000157728 157 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Nron-204ENSMUST00000158971 370 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm26556-201ENSMUST00000180645 320 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm28781-201ENSMUST00000185760 696 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm29307-201ENSMUST00000187367 696 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm19641-201ENSMUST00000188432 417 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm29339-201ENSMUST00000189613 696 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm28779-201ENSMUST00000189678 323 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm29407-201ENSMUST00000191468 696 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm44961-201ENSMUST00000207450 196 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Snord14e-201ENSMUST00000082857 90 ntBASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.77□□□□□ -1.81
Ubfd1Q78JW9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm11221-201ENSMUST00000117230 597 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm14975-201ENSMUST00000118741 664 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm15231-201ENSMUST00000119174 447 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm11582-201ENSMUST00000121041 236 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm11849-201ENSMUST00000121293 261 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Gm13368-201ENSMUST00000122443 430 ntBASIC3.76□□□□□ -1.81
Ubfd1Q78JW9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms