Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Scn10aQ6QIY3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Scn10aQ6QIY3 Gm12935-201ENSMUST00000119352 246 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm25883-201ENSMUST00000157781 271 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm23583-201ENSMUST00000158533 289 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm24638-201ENSMUST00000179807 132 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm44181-201ENSMUST00000203106 483 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm8249-201ENSMUST00000219225 465 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm8338-201ENSMUST00000163928 363 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm9892-201ENSMUST00000182415 992 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Scn10aQ6QIY3 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.46□□□□□ -2.01
Scn10aQ6QIY3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm15399-201ENSMUST00000118055 724 ntBASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm25971-201ENSMUST00000158953 286 ntBASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.46□□□□□ -2.02
Scn10aQ6QIY3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm14652-201ENSMUST00000118479 235 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm26345-201ENSMUST00000157534 120 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm4263-202ENSMUST00000221392 667 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm26922-201ENSMUST00000082687 72 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm12515-201ENSMUST00000120116 361 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm9375-201ENSMUST00000208899 903 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm23447-201ENSMUST00000082798 163 ntBASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Scn10aQ6QIY3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm28191-201ENSMUST00000189112 211 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm37162-201ENSMUST00000191708 551 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm43115-201ENSMUST00000196244 160 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm43626-201ENSMUST00000198575 162 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm43124-201ENSMUST00000201878 278 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm22971-201ENSMUST00000083305 97 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm23455-201ENSMUST00000083331 100 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.44□□□□□ -2.02
Scn10aQ6QIY3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Scn10aQ6QIY3 Gm7123-201ENSMUST00000117647 213 ntBASIC2.43□□□□□ -2.02
Scn10aQ6QIY3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms