Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm37692-201ENSMUST00000192633 232 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm38044-201ENSMUST00000192964 487 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm18703-201ENSMUST00000215318 333 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Mir19a-201ENSMUST00000083482 82 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm24118-201ENSMUST00000103972 126 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm22771-201ENSMUST00000104449 91 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm13046-201ENSMUST00000117391 501 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm12149-201ENSMUST00000117511 654 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm14793-201ENSMUST00000118739 311 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm13482-201ENSMUST00000119842 254 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm22076-201ENSMUST00000158601 84 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm22108-201ENSMUST00000177961 106 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm24925-201ENSMUST00000178157 107 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm24798-201ENSMUST00000179334 106 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm27374-201ENSMUST00000183660 81 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm45023-201ENSMUST00000207951 379 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm3442-201ENSMUST00000216808 710 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm4017-201ENSMUST00000084813 338 ntBASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddx58Q6Q899 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm14973-201ENSMUST00000117248 255 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm12125-201ENSMUST00000117261 736 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm13167-201ENSMUST00000118554 578 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm13692-201ENSMUST00000120774 371 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm15142-201ENSMUST00000121013 856 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm6762-201ENSMUST00000121769 289 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm12045-201ENSMUST00000122122 573 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm25294-201ENSMUST00000122791 104 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm23028-201ENSMUST00000158773 265 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Mir3066-201ENSMUST00000175296 83 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Mir7578-201ENSMUST00000183455 82 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm27308-201ENSMUST00000184807 233 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm44343-201ENSMUST00000196702 90 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm45380-201ENSMUST00000210465 315 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm23932-201ENSMUST00000082914 107 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Snora31-201ENSMUST00000083213 130 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm25581-201ENSMUST00000083410 164 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.21□□□□□ -1.74
Ddx58Q6Q899 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ddx58Q6Q899 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms