Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm44548-201ENSMUST00000208929 192 ntBASIC1.56□□□□□ -2.16
Col7a1Q63870 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.56□□□□□ -2.16
Col7a1Q63870 Mir3069-201ENSMUST00000198802 65 ntBASIC1.56□□□□□ -2.16
Col7a1Q63870 AC105407.3-201ENSMUST00000224161 648 ntBASIC1.56□□□□□ -2.16
Col7a1Q63870 Mir221-201ENSMUST00000083488 95 ntBASIC1.56□□□□□ -2.16
Col7a1Q63870 AC159476.1-201ENSMUST00000215914 1668 ntBASIC1.55□□□□□ -2.16
Col7a1Q63870 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
Col7a1Q63870 Gm11268-201ENSMUST00000118347 267 ntBASIC1.55□□□□□ -2.16
Col7a1Q63870 Gm5937-201ENSMUST00000119715 643 ntBASIC1.55□□□□□ -2.16
Col7a1Q63870 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.55□□□□□ -2.16
Col7a1Q63870 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col7a1Q63870 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col7a1Q63870 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col7a1Q63870 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col7a1Q63870 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col7a1Q63870 Gm25979-201ENSMUST00000157177 138 ntBASIC1.55□□□□□ -2.16
Col7a1Q63870 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col7a1Q63870 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm14898-201ENSMUST00000120202 645 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm37337-201ENSMUST00000192601 993 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Col7a1Q63870 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col7a1Q63870 AC123052.1-201ENSMUST00000220604 4616 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm26387-201ENSMUST00000104238 132 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm12876-201ENSMUST00000120975 408 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm25051-201ENSMUST00000158602 249 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC1.54□□□□□ -2.16
Col7a1Q63870 Gm29534-201ENSMUST00000187328 382 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.54□□□□□ -2.16
Col7a1Q63870 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col7a1Q63870 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Col7a1Q63870 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm13409-201ENSMUST00000122072 546 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm26278-201ENSMUST00000157098 132 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm22866-201ENSMUST00000083947 177 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm22554-201ENSMUST00000157798 147 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.53□□□□□ -2.16
Col7a1Q63870 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Col7a1Q63870 Gm16326-201ENSMUST00000162843 414 ntBASIC1.53□□□□□ -2.17
Col7a1Q63870 Gm27608-201ENSMUST00000184822 162 ntBASIC1.53□□□□□ -2.17
Col7a1Q63870 Gm6651-201ENSMUST00000189471 271 ntBASIC1.53□□□□□ -2.17
Col7a1Q63870 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.53□□□□□ -2.17
Col7a1Q63870 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
Col7a1Q63870 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col7a1Q63870 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col7a1Q63870 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm11556-201ENSMUST00000120751 288 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm24769-201ENSMUST00000158506 129 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm7909-201ENSMUST00000182688 614 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Col7a1Q63870 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col7a1Q63870 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col7a1Q63870 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm44462-201ENSMUST00000199696 129 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm5358-201ENSMUST00000212814 353 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Gm25038-201ENSMUST00000082928 130 ntBASIC1.52□□□□□ -2.17
Col7a1Q63870 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col7a1Q63870 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm13510-201ENSMUST00000118659 429 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm15785-201ENSMUST00000119145 694 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Mir7016-201ENSMUST00000184308 72 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm27245-201ENSMUST00000184385 376 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm27330-201ENSMUST00000184689 132 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Col7a1Q63870 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col7a1Q63870 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm16318-201ENSMUST00000162402 601 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm22565-201ENSMUST00000175540 69 ntBASIC1.51□□□□□ -2.17
Col7a1Q63870 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col7a1Q63870 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.51□□□□□ -2.17
Col7a1Q63870 Gm8679-201ENSMUST00000210651 1036 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms