Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm28628-201ENSMUST00000187006 264 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm28629-201ENSMUST00000187309 263 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm18691-201ENSMUST00000203593 872 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm7948-201ENSMUST00000212607 844 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm24921-201ENSMUST00000083024 107 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm22739-201ENSMUST00000083437 160 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim27Q62158 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim27Q62158 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim27Q62158 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm12492-201ENSMUST00000117665 564 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm14971-201ENSMUST00000117980 663 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm12640-201ENSMUST00000120097 310 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm12095-201ENSMUST00000121962 816 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim27Q62158 Gm2020-201ENSMUST00000145242 579 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm25334-201ENSMUST00000158036 110 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm24730-201ENSMUST00000158228 117 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm16588-201ENSMUST00000162889 355 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim27Q62158 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim27Q62158 Gm26177-201ENSMUST00000178683 107 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm26297-201ENSMUST00000179464 132 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm8649-201ENSMUST00000181799 233 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm44387-201ENSMUST00000196298 145 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm25203-202ENSMUST00000200458 216 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm45513-201ENSMUST00000210228 376 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Trim27Q62158 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim27Q62158 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm25203-201ENSMUST00000082842 215 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Gm23932-201ENSMUST00000082914 107 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.75□□□□□ -1.81
Trim27Q62158 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim27Q62158 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim27Q62158 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Trim27Q62158 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim27Q62158 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Gm8840-201ENSMUST00000122454 386 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm23791-201ENSMUST00000122553 293 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.74□□□□□ -1.81
Trim27Q62158 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm21893-201ENSMUST00000179119 397 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Gm6651-201ENSMUST00000189471 271 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm19649-201ENSMUST00000201126 822 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm44125-201ENSMUST00000203068 448 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm44449-201ENSMUST00000203610 153 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm46233-201ENSMUST00000217831 449 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim27Q62158 Mir463-201ENSMUST00000093570 75 ntBASIC3.74□□□□□ -1.81
Trim27Q62158 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Trim27Q62158 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim27Q62158 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim27Q62158 Gm25414-201ENSMUST00000101814 107 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm14101-201ENSMUST00000121502 473 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim27Q62158 Gm17119-201ENSMUST00000163943 280 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim27Q62158 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim27Q62158 Gm43746-201ENSMUST00000200028 317 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm43026-201ENSMUST00000202972 325 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim27Q62158 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Trim27Q62158 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim27Q62158 Gm16419-201ENSMUST00000221057 625 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim27Q62158 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim27Q62158 Gm23516-201ENSMUST00000093728 107 ntBASIC3.73□□□□□ -1.81
Trim27Q62158 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim27Q62158 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim27Q62158 Gm12584-201ENSMUST00000117109 1105 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm7123-201ENSMUST00000117647 213 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms