Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm21853-201ENSMUST00000180071 664 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm27445-201ENSMUST00000184484 72 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm29216-201ENSMUST00000187117 492 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm29495-201ENSMUST00000189319 664 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm28155-201ENSMUST00000191066 151 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm37869-201ENSMUST00000193385 595 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm37617-201ENSMUST00000194309 159 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm43541-201ENSMUST00000197208 581 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.88□□□□□ -1.79
CtcfQ61164 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm17906-201ENSMUST00000202480 901 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm8423-201ENSMUST00000211387 607 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm7380-201ENSMUST00000211599 466 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm9309-201ENSMUST00000223537 546 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm23242-201ENSMUST00000083055 107 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm10242-201ENSMUST00000090064 330 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CtcfQ61164 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CtcfQ61164 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CtcfQ61164 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CtcfQ61164 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm15025-201ENSMUST00000118434 418 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CtcfQ61164 Gm15060-201ENSMUST00000119550 948 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm2318-201ENSMUST00000119623 639 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm2768-201ENSMUST00000121062 250 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm7398-201ENSMUST00000178589 639 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm7375-201ENSMUST00000179232 639 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm3681-201ENSMUST00000179940 639 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CtcfQ61164 Gm6947-201ENSMUST00000186254 78 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm28623-201ENSMUST00000187219 192 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.87□□□□□ -1.79
CtcfQ61164 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CtcfQ61164 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CtcfQ61164 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CtcfQ61164 Gm22810-201ENSMUST00000082741 158 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Gm25205-201ENSMUST00000082841 103 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.87□□□□□ -1.79
CtcfQ61164 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CtcfQ61164 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CtcfQ61164 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.87□□□□□ -1.79
CtcfQ61164 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CtcfQ61164 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CtcfQ61164 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CtcfQ61164 Gm24127-201ENSMUST00000104110 130 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm26145-201ENSMUST00000104476 127 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CtcfQ61164 Gm11577-201ENSMUST00000118030 737 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm15026-201ENSMUST00000119219 458 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm12543-201ENSMUST00000120410 543 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm11522-201ENSMUST00000120533 176 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm15244-201ENSMUST00000121122 130 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CtcfQ61164 Gm24553-201ENSMUST00000158653 131 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm23568-201ENSMUST00000177960 92 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm22166-201ENSMUST00000178419 121 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm23288-201ENSMUST00000179213 121 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm24829-201ENSMUST00000179245 92 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Mir496b-201ENSMUST00000184935 113 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm28740-201ENSMUST00000186142 215 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm20162-201ENSMUST00000193629 871 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm37353-201ENSMUST00000194497 313 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm43559-201ENSMUST00000198755 466 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm5034-201ENSMUST00000199115 634 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CtcfQ61164 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.86□□□□□ -1.79
CtcfQ61164 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CtcfQ61164 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CtcfQ61164 Gm9818-201ENSMUST00000050900 255 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CtcfQ61164 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Gm23733-201ENSMUST00000083750 106 ntBASIC3.86□□□□□ -1.79
CtcfQ61164 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CtcfQ61164 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CtcfQ61164 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CtcfQ61164 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms