Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm22843-201ENSMUST00000157710 134 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm19203-201ENSMUST00000174049 939 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm26960-201ENSMUST00000182263 412 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Mir7241-201ENSMUST00000184532 64 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Ighv10-4-201ENSMUST00000193702 299 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm18982-201ENSMUST00000198118 529 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Mir6994-201ENSMUST00000198985 73 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm44295-201ENSMUST00000203805 437 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm44964-201ENSMUST00000207011 273 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm5649-201ENSMUST00000217918 951 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm25090-201ENSMUST00000104000 132 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm4910-201ENSMUST00000119605 366 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm24060-201ENSMUST00000157494 95 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm24879-201ENSMUST00000158386 143 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm25835-201ENSMUST00000158917 144 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Mir5101-201ENSMUST00000175181 83 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Mir3066-201ENSMUST00000175296 83 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Spin2g-201ENSMUST00000178425 687 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm27602-201ENSMUST00000183861 111 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm28358-202ENSMUST00000189292 223 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm19774-201ENSMUST00000190667 114 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm2719-201ENSMUST00000191929 444 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm6140-201ENSMUST00000192494 966 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm43765-201ENSMUST00000196303 893 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm45252-201ENSMUST00000211579 397 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm7948-201ENSMUST00000212607 844 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 AC154184.2-201ENSMUST00000225335 349 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm26129-201ENSMUST00000082719 107 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trav3-1Q5R1I8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm15783-201ENSMUST00000117521 633 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm11854-201ENSMUST00000117839 446 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm12401-201ENSMUST00000118435 228 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Mir7674-201ENSMUST00000184964 63 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm32175-201ENSMUST00000193641 346 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm37085-201ENSMUST00000193780 196 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm18116-201ENSMUST00000220920 537 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC155305.1-201ENSMUST00000222207 319 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC151730.2-201ENSMUST00000224027 475 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC158955.1-201ENSMUST00000227140 385 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Trav3-1Q5R1I8 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Trav3-1Q5R1I8 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm44625-201ENSMUST00000207838 1561 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm22782-201ENSMUST00000104082 132 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm12814-201ENSMUST00000117091 846 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms