Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir804-201ENSMUST00000103251 95 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14602-201ENSMUST00000118625 340 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm12156-201ENSMUST00000119188 554 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14940-201ENSMUST00000119309 495 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm22478-201ENSMUST00000122570 154 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm23980-201ENSMUST00000157135 158 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm8161-201ENSMUST00000168739 481 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm4540-201ENSMUST00000170669 429 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm25944-201ENSMUST00000178758 94 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm3852-201ENSMUST00000182781 264 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm37676-201ENSMUST00000195496 507 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm44519-201ENSMUST00000206486 122 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr895-201ENSMUST00000093864 951 ntBASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14579-201ENSMUST00000117068 283 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm13046-201ENSMUST00000117391 501 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14843-201ENSMUST00000119596 212 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm14982-201ENSMUST00000121102 442 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm12155-201ENSMUST00000121267 160 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24212-201ENSMUST00000158258 132 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm23860-201ENSMUST00000179446 132 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Mir7013-201ENSMUST00000183540 72 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm27470-201ENSMUST00000184070 210 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Mir6993-201ENSMUST00000184912 65 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm8031-201ENSMUST00000213430 626 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm22622-201ENSMUST00000082870 129 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Gm22444-201ENSMUST00000093693 108 ntBASIC2.09□□□□□ -2.07
Trav5d-4Q5R1F6 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trav5d-4Q5R1F6 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm23867-201ENSMUST00000122649 274 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm23391-201ENSMUST00000157579 104 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm24691-201ENSMUST00000157762 140 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm24875-201ENSMUST00000158888 104 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm16289-201ENSMUST00000162079 183 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm37979-201ENSMUST00000193065 712 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm44161-201ENSMUST00000203532 253 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm4921-201ENSMUST00000219804 992 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Snord104-201ENSMUST00000083192 70 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Gm4017-201ENSMUST00000084813 338 ntBASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav5d-4Q5R1F6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Gm14821-201ENSMUST00000121975 435 ntBASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav5d-4Q5R1F6 Gm12238-201ENSMUST00000127764 124 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms