Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23557-201ENSMUST00000157820 138 ntBASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Gm28453-203ENSMUST00000187041 189 ntBASIC8.46□□□□□ -1.06
Trim41Q5NCC3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Gm43407-201ENSMUST00000199816 317 ntBASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Gm26165-201ENSMUST00000083791 138 ntBASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim41Q5NCC3 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Gm24371-201ENSMUST00000122662 267 ntBASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 AC159896.1-201ENSMUST00000215264 215 ntBASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Gm24166-201ENSMUST00000082724 135 ntBASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim41Q5NCC3 Gm19514-201ENSMUST00000206856 4489 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm11598-201ENSMUST00000119257 357 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm27510-201ENSMUST00000158214 64 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm28304-201ENSMUST00000185977 312 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm29256-201ENSMUST00000189094 312 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm28484-201ENSMUST00000190606 312 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm37692-201ENSMUST00000192633 232 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm23099-201ENSMUST00000083454 139 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm23741-201ENSMUST00000097237 171 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Gm35755-201ENSMUST00000222392 2077 ntBASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim41Q5NCC3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm21955-201ENSMUST00000194137 4968 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm37606-201ENSMUST00000191816 3116 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm23000-201ENSMUST00000157083 139 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm22328-201ENSMUST00000158074 112 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm18177-201ENSMUST00000188373 404 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Gm37104-201ENSMUST00000193278 196 ntBASIC8.43□□□□□ -1.06
Trim41Q5NCC3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Trim41Q5NCC3 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm42559-201ENSMUST00000201811 3532 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm15846-201ENSMUST00000116022 320 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm25438-201ENSMUST00000158281 110 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm25450-201ENSMUST00000179144 107 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm29452-201ENSMUST00000187996 313 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm28978-201ENSMUST00000191120 615 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm37732-201ENSMUST00000194377 316 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 AC140344.1-201ENSMUST00000223384 387 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Snord59a-201ENSMUST00000082844 74 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Snord14e-201ENSMUST00000082857 90 ntBASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim41Q5NCC3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm14657-201ENSMUST00000117461 302 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm12039-201ENSMUST00000118219 180 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms