Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm23128-202ENSMUST00000196578 133 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm34314-201ENSMUST00000203622 367 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm17838-201ENSMUST00000205872 876 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm18268-201ENSMUST00000208445 943 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm45879-201ENSMUST00000212521 392 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm2544-201ENSMUST00000222702 756 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Usp28Q5I043 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm9009-201ENSMUST00000117321 326 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm25979-201ENSMUST00000157177 138 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm24060-201ENSMUST00000157494 95 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm7346-201ENSMUST00000169661 476 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Mir8118-201ENSMUST00000183962 129 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm43626-201ENSMUST00000198575 162 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm19244-201ENSMUST00000204340 253 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm46103-201ENSMUST00000217614 341 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.91□□□□□ -1.94
Usp28Q5I043 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usp28Q5I043 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usp28Q5I043 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm24611-201ENSMUST00000083272 107 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm8074-201ENSMUST00000095071 252 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usp28Q5I043 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.91□□□□□ -1.94
Usp28Q5I043 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Usp28Q5I043 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Usp28Q5I043 Gm25539-201ENSMUST00000116886 122 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm13614-201ENSMUST00000117306 503 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm16431-201ENSMUST00000117454 431 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm11582-201ENSMUST00000121041 236 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm6591-201ENSMUST00000121063 434 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm23167-201ENSMUST00000157155 103 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm3470-201ENSMUST00000160819 420 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm6395-201ENSMUST00000167639 691 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm25026-201ENSMUST00000175017 188 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm18667-201ENSMUST00000186523 484 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm28847-201ENSMUST00000186778 700 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm29365-201ENSMUST00000189461 699 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm37599-201ENSMUST00000193067 489 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm37616-201ENSMUST00000193974 322 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm42958-201ENSMUST00000197595 318 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm45105-201ENSMUST00000207824 397 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Mir421-201ENSMUST00000083575 76 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.9□□□□□ -1.95
Usp28Q5I043 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp28Q5I043 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usp28Q5I043 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Usp28Q5I043 Gm24951-201ENSMUST00000102182 109 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms