Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm27580-201ENSMUST00000183666 149 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm27979-201ENSMUST00000185126 56 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm6112-201ENSMUST00000208037 629 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm25402-201ENSMUST00000082966 131 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 Gm24475-201ENSMUST00000157435 143 ntBASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 Gm22978-201ENSMUST00000082607 160 ntBASIC3.15□□□□□ -1.91
Ccdc88bQ4QRL3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Gm24342-201ENSMUST00000103907 104 ntBASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Gm27544-201ENSMUST00000185069 155 ntBASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Gm18660-201ENSMUST00000199542 629 ntBASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc88bQ4QRL3 Mir1927-201ENSMUST00000158579 109 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm22116-201ENSMUST00000158791 141 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm9022-202ENSMUST00000183285 483 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Mir6394-201ENSMUST00000184738 99 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm28745-201ENSMUST00000190069 305 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm37616-201ENSMUST00000193974 322 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc88bQ4QRL3 Gm42664-201ENSMUST00000199417 3239 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Gm12432-201ENSMUST00000119540 186 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Gm25888-201ENSMUST00000157778 302 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Gm7182-201ENSMUST00000193351 732 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Gm44011-201ENSMUST00000203336 394 ntBASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc88bQ4QRL3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm22225-201ENSMUST00000157358 278 ntBASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm27468-201ENSMUST00000183577 106 ntBASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.11□□□□□ -1.91
Ccdc88bQ4QRL3 Gm25728-201ENSMUST00000104525 159 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Mir6985-201ENSMUST00000184641 61 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Mir7678-201ENSMUST00000185076 71 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Gm28149-201ENSMUST00000187102 378 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Gm28768-201ENSMUST00000189034 378 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.1□□□□□ -1.91
Ccdc88bQ4QRL3 Gm14588-201ENSMUST00000119895 172 ntBASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Gm26001-201ENSMUST00000157989 103 ntBASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Gm27271-201ENSMUST00000183509 170 ntBASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc88bQ4QRL3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm12509-201ENSMUST00000118033 609 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm12550-201ENSMUST00000118478 329 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm25976-201ENSMUST00000158695 130 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm8292-201ENSMUST00000162574 396 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Rny1-201ENSMUST00000083767 112 ntBASIC3.09□□□□□ -1.92
Ccdc88bQ4QRL3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Gm22858-201ENSMUST00000174972 76 ntBASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Gm43582-201ENSMUST00000196149 343 ntBASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Gm24044-201ENSMUST00000083107 156 ntBASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Gm25124-201ENSMUST00000083345 164 ntBASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc88bQ4QRL3 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.07□□□□□ -1.92
Ccdc88bQ4QRL3 Gm5900-201ENSMUST00000179862 375 ntBASIC3.07□□□□□ -1.92
Ccdc88bQ4QRL3 Gm43550-201ENSMUST00000200597 303 ntBASIC3.07□□□□□ -1.92
Ccdc88bQ4QRL3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc88bQ4QRL3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc88bQ4QRL3 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Gm3030-201ENSMUST00000163410 516 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms