Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm4916-201ENSMUST00000126139 642 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm43541-201ENSMUST00000197208 581 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm44355-201ENSMUST00000200417 104 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm43039-201ENSMUST00000202883 963 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm4036-201ENSMUST00000220842 626 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Snord35b-201ENSMUST00000082833 87 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm26423-201ENSMUST00000104277 128 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm12335-201ENSMUST00000119738 327 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm15142-201ENSMUST00000121013 856 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm7308-201ENSMUST00000121087 447 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm23118-201ENSMUST00000122657 187 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm25902-201ENSMUST00000158493 318 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm9593-201ENSMUST00000166034 469 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm28356-202ENSMUST00000187566 858 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm19641-201ENSMUST00000188432 417 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm45192-201ENSMUST00000206749 283 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Gm10088-201ENSMUST00000074116 423 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.01□□□□□ -1.93
Trim40Q3UWA4 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trim40Q3UWA4 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm42870-201ENSMUST00000199355 3470 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Mir690-201ENSMUST00000102110 109 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm26384-201ENSMUST00000102183 110 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm13614-201ENSMUST00000117306 503 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm14981-201ENSMUST00000117325 943 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm14835-201ENSMUST00000119039 315 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm22986-201ENSMUST00000122753 130 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm22961-201ENSMUST00000157964 106 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm22733-201ENSMUST00000158094 91 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm22532-201ENSMUST00000158822 140 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm17183-201ENSMUST00000171170 493 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm3370-201ENSMUST00000171785 500 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm27796-201ENSMUST00000183863 261 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm27921-201ENSMUST00000183968 108 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Mir6413-201ENSMUST00000184049 108 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm19637-201ENSMUST00000185933 579 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm28474-201ENSMUST00000188501 315 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm29740-201ENSMUST00000193182 655 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm37732-201ENSMUST00000194377 316 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm19126-201ENSMUST00000207896 509 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trim40Q3UWA4 AC127371.1-202ENSMUST00000228923 306 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm37630-201ENSMUST00000194210 1456 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm43718-201ENSMUST00000197524 1857 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm6207-201ENSMUST00000120075 1386 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 Gm6228-201ENSMUST00000178856 1386 ntBASIC3□□□□□ -1.93
Trim40Q3UWA4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms