Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm5646-201ENSMUST00000120568 714 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm23791-201ENSMUST00000122553 293 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm24517-201ENSMUST00000122560 107 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm14389-201ENSMUST00000140453 241 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm25883-201ENSMUST00000157781 271 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm20672-201ENSMUST00000176605 261 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm21893-201ENSMUST00000179119 397 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm27700-201ENSMUST00000185003 81 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm17929-201ENSMUST00000186851 627 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm1833-201ENSMUST00000191608 682 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm19126-201ENSMUST00000207896 509 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm45742-201ENSMUST00000212400 433 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm8249-201ENSMUST00000219225 465 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm7198-201ENSMUST00000219635 1074 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm15176-201ENSMUST00000117734 135 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm26027-201ENSMUST00000122725 268 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm6265-201ENSMUST00000149263 231 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm18417-201ENSMUST00000176564 648 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Mir5123-201ENSMUST00000177794 83 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm26585-201ENSMUST00000180890 630 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm43393-201ENSMUST00000200147 194 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm34701-202ENSMUST00000204685 360 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm44212-201ENSMUST00000205016 897 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm44754-201ENSMUST00000208155 400 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm20039-201ENSMUST00000210329 394 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm18026-201ENSMUST00000222789 727 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm25404-201ENSMUST00000082970 107 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Mir21a-201ENSMUST00000083521 92 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.98□□□□□ -1.93
Trafd1Q3UDK1 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Mir599-201ENSMUST00000102378 88 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm14669-201ENSMUST00000118841 250 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm12748-201ENSMUST00000120763 504 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm12819-201ENSMUST00000122223 629 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21842-201ENSMUST00000177552 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21626-201ENSMUST00000177791 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21562-201ENSMUST00000177888 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21539-201ENSMUST00000177925 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17522-201ENSMUST00000178144 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21599-201ENSMUST00000178249 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21914-201ENSMUST00000178452 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21723-201ENSMUST00000178692 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21916-201ENSMUST00000178771 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21801-201ENSMUST00000178865 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21633-201ENSMUST00000178941 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21821-201ENSMUST00000179646 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21588-201ENSMUST00000180074 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21780-201ENSMUST00000180128 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21572-201ENSMUST00000180134 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm21529-201ENSMUST00000180175 498 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm29370-202ENSMUST00000187476 499 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm43096-201ENSMUST00000196173 421 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm42828-201ENSMUST00000199669 469 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Gm43198-201ENSMUST00000200927 326 ntBASIC2.97□□□□□ -1.93
Trafd1Q3UDK1 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms