Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm13172-201ENSMUST00000118685 256 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm15026-201ENSMUST00000119219 458 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm15112-201ENSMUST00000120152 860 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm13677-201ENSMUST00000120739 595 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm11849-201ENSMUST00000121293 261 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm11384-201ENSMUST00000121376 303 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm23120-201ENSMUST00000157654 287 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm25956-201ENSMUST00000175115 217 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm43828-201ENSMUST00000196890 639 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm8940-201ENSMUST00000212585 219 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 AC123944.2-201ENSMUST00000215290 382 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 AC131720.3-201ENSMUST00000219113 275 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 AC165092.2-201ENSMUST00000224681 368 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm22974-201ENSMUST00000083301 103 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm23845-201ENSMUST00000083834 152 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Mir496a-201ENSMUST00000093627 79 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Gm25207-201ENSMUST00000093745 107 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm2099-202ENSMUST00000223310 3341 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm22498-201ENSMUST00000104497 86 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm23781-201ENSMUST00000157940 308 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm13249-201ENSMUST00000177803 345 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Mir713-201ENSMUST00000178651 108 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm13144-201ENSMUST00000179385 345 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm37568-201ENSMUST00000191755 364 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm6059-201ENSMUST00000196903 340 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm23645-201ENSMUST00000083228 108 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col8a1Q00780 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col8a1Q00780 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.92□□□□□ -1.78
Col8a1Q00780 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm25169-201ENSMUST00000104190 129 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm15058-201ENSMUST00000117689 458 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm14560-201ENSMUST00000118672 375 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm23554-201ENSMUST00000157818 110 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm25907-201ENSMUST00000158486 125 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm27773-201ENSMUST00000184087 78 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms