Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.56□□□□□ -2
Shox2P70390 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shox2P70390 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shox2P70390 Gm23911-201ENSMUST00000104596 134 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.56□□□□□ -2
Shox2P70390 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shox2P70390 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shox2P70390 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shox2P70390 Gm13901-201ENSMUST00000137252 468 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm24060-201ENSMUST00000157494 95 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm17929-201ENSMUST00000186851 627 ntBASIC2.56□□□□□ -2
Shox2P70390 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.56□□□□□ -2
Shox2P70390 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.56□□□□□ -2
Shox2P70390 Gm45742-201ENSMUST00000212400 433 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm8031-201ENSMUST00000213430 626 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.56□□□□□ -2
Shox2P70390 Gm18039-201ENSMUST00000217816 728 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.56□□□□□ -2
Shox2P70390 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.56□□□□□ -2
Shox2P70390 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.56□□□□□ -2
Shox2P70390 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shox2P70390 Gm26439-201ENSMUST00000082592 106 ntBASIC2.56□□□□□ -2
Shox2P70390 Gm22970-201ENSMUST00000083304 186 ntBASIC2.56□□□□□ -2
Shox2P70390 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Shox2P70390 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Shox2P70390 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shox2P70390 Gm26143-201ENSMUST00000104480 108 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm15125-201ENSMUST00000116185 800 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm26473-201ENSMUST00000116763 127 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm16017-201ENSMUST00000119834 208 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm14841-201ENSMUST00000121067 758 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm11321-201ENSMUST00000121257 902 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm24358-201ENSMUST00000158424 288 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.55□□□□□ -2
Shox2P70390 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm19641-201ENSMUST00000188432 417 ntBASIC2.55□□□□□ -2
Shox2P70390 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.55□□□□□ -2
Shox2P70390 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.55□□□□□ -2
Shox2P70390 Gm37807-201ENSMUST00000194310 190 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm38018-201ENSMUST00000195651 540 ntBASIC2.55□□□□□ -2
Shox2P70390 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.55□□□□□ -2
Shox2P70390 Gm44718-201ENSMUST00000206886 359 ntBASIC2.55□□□□□ -2
Shox2P70390 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm18645-202ENSMUST00000212222 760 ntBASIC2.55□□□□□ -2
Shox2P70390 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.55□□□□□ -2
Shox2P70390 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.55□□□□□ -2
Shox2P70390 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm26494-201ENSMUST00000083154 143 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm24493-201ENSMUST00000083805 143 ntBASIC2.55□□□□□ -2
Shox2P70390 Gm24446-201ENSMUST00000083982 156 ntBASIC2.55□□□□□ -2
Shox2P70390 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.55□□□□□ -2
Shox2P70390 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.55□□□□□ -2
Shox2P70390 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shox2P70390 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.54□□□□□ -2
Shox2P70390 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Shox2P70390 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Shox2P70390 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm25728-201ENSMUST00000104525 159 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm12268-201ENSMUST00000118398 442 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm14901-201ENSMUST00000119001 283 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm23886-201ENSMUST00000122684 313 ntBASIC2.54□□□□□ -2
Shox2P70390 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.54□□□□□ -2
Shox2P70390 Gm24787-201ENSMUST00000157380 123 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm24958-201ENSMUST00000158009 97 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.54□□□□□ -2
Shox2P70390 Gm16232-201ENSMUST00000162856 167 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm25707-201ENSMUST00000175120 96 ntBASIC2.54□□□□□ -2
Shox2P70390 Mir7068-201ENSMUST00000183439 74 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.54□□□□□ -2
Shox2P70390 Gm28113-201ENSMUST00000188280 229 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.54□□□□□ -2
Shox2P70390 Gm17935-201ENSMUST00000196649 772 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.54□□□□□ -2
Shox2P70390 Mir7232-201ENSMUST00000197929 74 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm43407-201ENSMUST00000199816 317 ntBASIC2.54□□□□□ -2
Shox2P70390 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.54□□□□□ -2
Shox2P70390 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Shox2P70390 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Shox2P70390 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Shox2P70390 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Shox2P70390 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.54□□□□□ -2
Shox2P70390 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.53□□□□□ -2
Shox2P70390 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shox2P70390 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shox2P70390 Gm15282-201ENSMUST00000117707 300 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm11460-201ENSMUST00000118200 361 ntBASIC2.53□□□□□ -2
Shox2P70390 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.53□□□□□ -2
Shox2P70390 Gm11356-201ENSMUST00000118974 192 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.53□□□□□ -2
Shox2P70390 Gm24240-201ENSMUST00000157785 135 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm23642-201ENSMUST00000157858 258 ntBASIC2.53□□□□□ -2
Shox2P70390 Nron-204ENSMUST00000158971 370 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm20534-201ENSMUST00000172957 172 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm27698-201ENSMUST00000184060 249 ntBASIC2.53□□□□□ -2
Shox2P70390 Mir6401-201ENSMUST00000184499 109 ntBASIC2.53□□□□□ -2
Shox2P70390 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.53□□□□□ -2
Shox2P70390 Gm28623-201ENSMUST00000187219 192 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms