Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm22988-201ENSMUST00000122759 144 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.67□□□□□ -1.82
Lhx3P50481 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm22320-201ENSMUST00000157149 312 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm25860-201ENSMUST00000158252 126 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm9892-201ENSMUST00000182415 992 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lhx3P50481 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm43007-201ENSMUST00000197618 291 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm45400-201ENSMUST00000211603 653 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.67□□□□□ -1.82
Lhx3P50481 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm22423-201ENSMUST00000082861 184 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm23848-201ENSMUST00000083826 106 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lhx3P50481 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lhx3P50481 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Lhx3P50481 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lhx3P50481 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.67□□□□□ -1.82
Lhx3P50481 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm14594-201ENSMUST00000118052 537 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm14590-201ENSMUST00000118934 537 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm23078-201ENSMUST00000157848 148 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.66□□□□□ -1.82
Lhx3P50481 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm26189-201ENSMUST00000179879 107 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm14596-201ENSMUST00000180268 537 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm14595-201ENSMUST00000180335 537 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.66□□□□□ -1.82
Lhx3P50481 Mir6408-201ENSMUST00000183643 91 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm28148-201ENSMUST00000186924 697 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm28163-201ENSMUST00000187099 325 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.66□□□□□ -1.82
Lhx3P50481 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm37575-201ENSMUST00000195467 309 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm44016-201ENSMUST00000203463 164 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm34783-201ENSMUST00000209159 303 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lhx3P50481 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm23645-201ENSMUST00000083228 108 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Gm22868-201ENSMUST00000083955 164 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.66□□□□□ -1.82
Lhx3P50481 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lhx3P50481 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lhx3P50481 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Lhx3P50481 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Lhx3P50481 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lhx3P50481 Gm23987-201ENSMUST00000117039 129 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm12578-201ENSMUST00000121244 417 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lhx3P50481 Gm14804-201ENSMUST00000122322 508 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.65□□□□□ -1.83
Lhx3P50481 Gm24439-201ENSMUST00000157894 117 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Lhx3P50481 Gm6651-201ENSMUST00000189471 271 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm28098-201ENSMUST00000191361 699 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm38329-201ENSMUST00000193473 427 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm42832-201ENSMUST00000196361 745 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm43367-201ENSMUST00000199986 625 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Gm43578-201ENSMUST00000201250 459 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
Lhx3P50481 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.65□□□□□ -1.83
Lhx3P50481 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms