Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm6058-201ENSMUST00000154261 399 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shmt1P50431 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shmt1P50431 Gm26426-201ENSMUST00000177866 123 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm24100-201ENSMUST00000178592 79 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm24137-201ENSMUST00000180055 79 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm26060-201ENSMUST00000180094 123 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm22391-201ENSMUST00000180356 79 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Shmt1P50431 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm28951-201ENSMUST00000190742 313 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm44655-201ENSMUST00000207768 423 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm46138-201ENSMUST00000215294 426 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shmt1P50431 Gm25481-201ENSMUST00000083221 158 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Shmt1P50431 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Shmt1P50431 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Shmt1P50431 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.27□□□□□ -1.73
Shmt1P50431 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Shmt1P50431 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Gm24067-201ENSMUST00000104514 85 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Gm14282-201ENSMUST00000119484 240 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Gm22501-201ENSMUST00000158981 127 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm26430-201ENSMUST00000178054 107 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm23141-201ENSMUST00000178682 94 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm19427-201ENSMUST00000183619 208 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm37300-201ENSMUST00000193327 280 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Mir3970-201ENSMUST00000199287 90 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm19252-201ENSMUST00000204705 305 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Gm25793-201ENSMUST00000083287 107 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Gm23455-201ENSMUST00000083331 100 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Mir370-201ENSMUST00000083499 79 ntBASIC4.26□□□□□ -1.73
Shmt1P50431 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Shmt1P50431 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Shmt1P50431 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Shmt1P50431 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Shmt1P50431 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm24281-201ENSMUST00000104234 136 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm11874-201ENSMUST00000117437 130 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm12564-201ENSMUST00000119860 321 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm13239-201ENSMUST00000119920 637 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm11931-201ENSMUST00000121630 447 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm25325-201ENSMUST00000122559 86 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm23098-201ENSMUST00000157552 299 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm25666-201ENSMUST00000157702 107 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm23078-201ENSMUST00000157848 148 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm17148-201ENSMUST00000164702 249 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm26180-201ENSMUST00000179942 107 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm28995-201ENSMUST00000186625 261 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm43028-201ENSMUST00000202561 481 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm44609-201ENSMUST00000207157 460 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm44583-201ENSMUST00000207478 281 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Snord68-201ENSMUST00000082516 86 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Gm25929-201ENSMUST00000082784 107 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Shmt1P50431 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Shmt1P50431 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.25□□□□□ -1.73
Shmt1P50431 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Shmt1P50431 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Shmt1P50431 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Shmt1P50431 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Shmt1P50431 Gm24889-201ENSMUST00000104388 132 ntBASIC4.24□□□□□ -1.73
Shmt1P50431 Gm12871-201ENSMUST00000118758 438 ntBASIC4.24□□□□□ -1.73
Shmt1P50431 Gm11229-201ENSMUST00000121993 437 ntBASIC4.24□□□□□ -1.73
Shmt1P50431 Gm11403-201ENSMUST00000122195 369 ntBASIC4.24□□□□□ -1.73
Shmt1P50431 Gm25808-201ENSMUST00000122784 284 ntBASIC4.24□□□□□ -1.73
Shmt1P50431 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms