Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Rfx1P48377 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.32□□□□□ -1.56
Rfx1P48377 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx1P48377 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx1P48377 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Rfx1P48377 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx1P48377 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx1P48377 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Rfx1P48377 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm22676-201ENSMUST00000116972 129 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm15844-201ENSMUST00000118016 576 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm14841-201ENSMUST00000121067 758 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm12685-201ENSMUST00000121702 214 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm26098-201ENSMUST00000157247 288 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm26149-201ENSMUST00000157432 108 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm23581-201ENSMUST00000158531 63 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm24618-201ENSMUST00000177718 94 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm23953-201ENSMUST00000178214 94 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm25019-201ENSMUST00000179732 110 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm26332-201ENSMUST00000179813 94 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm22863-201ENSMUST00000180265 94 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm38053-201ENSMUST00000193938 160 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm43284-201ENSMUST00000200103 253 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 AC126440.1-201ENSMUST00000227098 349 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm26164-201ENSMUST00000083793 104 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Rfx1P48377 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Rfx1P48377 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.31□□□□□ -1.56
Rfx1P48377 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx1P48377 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx1P48377 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm25096-201ENSMUST00000104043 129 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx1P48377 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm11718-201ENSMUST00000119942 537 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm14303-201ENSMUST00000121320 171 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm15212-201ENSMUST00000122403 466 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm22561-201ENSMUST00000157331 84 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Nron-204ENSMUST00000158971 370 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm26400-201ENSMUST00000175012 85 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm23047-201ENSMUST00000177661 94 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm27543-201ENSMUST00000183562 177 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Mir8106-201ENSMUST00000184520 139 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm43712-201ENSMUST00000198020 291 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm44446-201ENSMUST00000204864 255 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm44543-201ENSMUST00000209136 396 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm7948-201ENSMUST00000212607 844 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Rfx1P48377 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.3□□□□□ -1.56
Rfx1P48377 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx1P48377 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Rfx1P48377 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Rfx1P48377 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rfx1P48377 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Rfx1P48377 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rfx1P48377 Gm43047-201ENSMUST00000200089 3460 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx1P48377 Gm14304-201ENSMUST00000117272 446 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm24507-201ENSMUST00000157683 134 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm23262-201ENSMUST00000158323 168 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm25655-201ENSMUST00000158465 290 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.29□□□□□ -1.56
Rfx1P48377 Gm27254-201ENSMUST00000183926 517 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm29218-205ENSMUST00000190846 615 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC5.29□□□□□ -1.56
Rfx1P48377 AC147545.1-201ENSMUST00000227528 108 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms