Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lig1P37913 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Gm21960-201ENSMUST00000181924 452 ntBASIC4.36□□□□□ -1.71
Lig1P37913 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.36□□□□□ -1.71
Lig1P37913 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.36□□□□□ -1.71
Lig1P37913 Gm42758-201ENSMUST00000202146 283 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Gm44295-201ENSMUST00000203805 437 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.36□□□□□ -1.71
Lig1P37913 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Gm19219-201ENSMUST00000215863 724 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lig1P37913 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Lig1P37913 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.36□□□□□ -1.71
Lig1P37913 Gm5955-201ENSMUST00000222712 219 ntBASIC4.36□□□□□ -1.71
Lig1P37913 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.36□□□□□ -1.71
Lig1P37913 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lig1P37913 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.36□□□□□ -1.71
Lig1P37913 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lig1P37913 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lig1P37913 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Lig1P37913 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lig1P37913 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lig1P37913 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.35□□□□□ -1.71
Lig1P37913 Gm23063-201ENSMUST00000102350 93 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm13239-201ENSMUST00000119920 637 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm12515-201ENSMUST00000120116 361 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm11606-201ENSMUST00000120706 617 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.35□□□□□ -1.71
Lig1P37913 Gm22320-201ENSMUST00000157149 312 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm22219-201ENSMUST00000157562 319 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm24014-201ENSMUST00000157728 157 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm23473-201ENSMUST00000158883 116 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lig1P37913 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.35□□□□□ -1.71
Lig1P37913 Npn2-202ENSMUST00000189275 235 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.35□□□□□ -1.71
Lig1P37913 Gm19726-201ENSMUST00000205008 240 ntBASIC4.35□□□□□ -1.71
Lig1P37913 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm25079-201ENSMUST00000082529 203 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lig1P37913 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lig1P37913 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lig1P37913 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.35□□□□□ -1.71
Lig1P37913 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.35□□□□□ -1.71
Lig1P37913 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lig1P37913 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lig1P37913 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Lig1P37913 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lig1P37913 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lig1P37913 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lig1P37913 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Lig1P37913 Gm25560-201ENSMUST00000104606 176 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm12509-201ENSMUST00000118033 609 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm12276-201ENSMUST00000121709 301 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm14649-201ENSMUST00000121814 324 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm14364-201ENSMUST00000129209 267 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.34□□□□□ -1.71
Lig1P37913 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.34□□□□□ -1.71
Lig1P37913 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lig1P37913 Gm20794-201ENSMUST00000177626 628 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm26556-201ENSMUST00000180645 320 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Mir6408-201ENSMUST00000183643 91 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Mir6938-201ENSMUST00000184173 63 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm29334-201ENSMUST00000190334 357 ntBASIC4.34□□□□□ -1.71
Lig1P37913 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm8747-201ENSMUST00000195392 751 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.34□□□□□ -1.71
Lig1P37913 Gm44092-201ENSMUST00000204470 258 ntBASIC4.34□□□□□ -1.71
Lig1P37913 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.34□□□□□ -1.71
Lig1P37913 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lig1P37913 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.34□□□□□ -1.71
Lig1P37913 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lig1P37913 Gm23925-201ENSMUST00000082471 132 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Gm24147-201ENSMUST00000082763 144 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.34□□□□□ -1.71
Lig1P37913 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lig1P37913 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lig1P37913 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Lig1P37913 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Lig1P37913 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.34□□□□□ -1.72
Lig1P37913 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.72
Lig1P37913 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.34□□□□□ -1.72
Lig1P37913 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Lig1P37913 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lig1P37913 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Lig1P37913 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lig1P37913 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lig1P37913 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lig1P37913 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lig1P37913 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lig1P37913 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lig1P37913 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lig1P37913 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lig1P37913 Gm15994-201ENSMUST00000118029 402 ntBASIC4.33□□□□□ -1.72
Lig1P37913 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.33□□□□□ -1.72
Lig1P37913 Gm14678-201ENSMUST00000121396 482 ntBASIC4.33□□□□□ -1.72
Lig1P37913 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms