Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.66□□□□□ -1.98
P20040 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.66□□□□□ -1.98
P20040 Gm17186-201ENSMUST00000171742 456 ntBASIC2.66□□□□□ -1.98
P20040 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.66□□□□□ -1.98
P20040 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.66□□□□□ -1.98
P20040 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
P20040 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.66□□□□□ -1.98
P20040 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.66□□□□□ -1.98
P20040 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.66□□□□□ -1.98
P20040 Gm44425-201ENSMUST00000203739 429 ntBASIC2.66□□□□□ -1.98
P20040 Gm44964-201ENSMUST00000207011 273 ntBASIC2.66□□□□□ -1.98
P20040 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.66□□□□□ -1.98
P20040 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.66□□□□□ -1.98
P20040 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.66□□□□□ -1.98
P20040 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.66□□□□□ -1.98
P20040 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.66□□□□□ -1.98
P20040 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
P20040 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
P20040 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
P20040 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
P20040 Mir193a-201ENSMUST00000083461 66 ntBASIC2.66□□□□□ -1.98
P20040 Gm25008-201ENSMUST00000083809 81 ntBASIC2.66□□□□□ -1.98
P20040 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
P20040 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.66□□□□□ -1.98
P20040 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
P20040 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
P20040 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
P20040 Gm22023-201ENSMUST00000104354 130 ntBASIC2.65□□□□□ -1.99
P20040 Gm11490-201ENSMUST00000118128 272 ntBASIC2.65□□□□□ -1.99
P20040 Gm12607-201ENSMUST00000120724 493 ntBASIC2.65□□□□□ -1.99
P20040 Gm23213-201ENSMUST00000122715 313 ntBASIC2.65□□□□□ -1.99
P20040 Gm13901-201ENSMUST00000137252 468 ntBASIC2.65□□□□□ -1.99
P20040 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.65□□□□□ -1.99
P20040 Gm14651-201ENSMUST00000147192 442 ntBASIC2.65□□□□□ -1.99
P20040 Gm24534-201ENSMUST00000157949 291 ntBASIC2.65□□□□□ -1.99
P20040 Gm23032-201ENSMUST00000157995 107 ntBASIC2.65□□□□□ -1.99
P20040 Gm16111-201ENSMUST00000162128 285 ntBASIC2.65□□□□□ -1.99
P20040 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm27783-201ENSMUST00000183534 105 ntBASIC2.65□□□□□ -1.99
P20040 Mir6372-201ENSMUST00000185114 109 ntBASIC2.65□□□□□ -1.99
P20040 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
P20040 Gm28650-201ENSMUST00000188413 411 ntBASIC2.65□□□□□ -1.99
P20040 Gm37281-201ENSMUST00000192412 439 ntBASIC2.65□□□□□ -1.99
P20040 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.65□□□□□ -1.99
P20040 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
P20040 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
P20040 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm43746-201ENSMUST00000200028 317 ntBASIC2.65□□□□□ -1.99
P20040 Gm43393-201ENSMUST00000200147 194 ntBASIC2.65□□□□□ -1.99
P20040 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.65□□□□□ -1.99
P20040 Gm29754-201ENSMUST00000206269 358 ntBASIC2.65□□□□□ -1.99
P20040 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm6012-201ENSMUST00000210821 730 ntBASIC2.65□□□□□ -1.99
P20040 Gm45439-201ENSMUST00000211723 359 ntBASIC2.65□□□□□ -1.99
P20040 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.65□□□□□ -1.99
P20040 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.65□□□□□ -1.99
P20040 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
P20040 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
P20040 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
P20040 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
P20040 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
P20040 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
P20040 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.65□□□□□ -1.99
P20040 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
P20040 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.64□□□□□ -1.99
P20040 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
P20040 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
P20040 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
P20040 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.64□□□□□ -1.99
P20040 Mir467h-201ENSMUST00000116759 121 ntBASIC2.64□□□□□ -1.99
P20040 Gm16171-201ENSMUST00000118004 324 ntBASIC2.64□□□□□ -1.99
P20040 Gm14901-201ENSMUST00000119001 283 ntBASIC2.64□□□□□ -1.99
P20040 Gm12016-201ENSMUST00000119079 681 ntBASIC2.64□□□□□ -1.99
P20040 Gm15452-201ENSMUST00000119877 240 ntBASIC2.64□□□□□ -1.99
P20040 Gm13751-201ENSMUST00000120280 752 ntBASIC2.64□□□□□ -1.99
P20040 Gm12372-201ENSMUST00000121654 768 ntBASIC2.64□□□□□ -1.99
P20040 Gm22026-201ENSMUST00000122735 281 ntBASIC2.64□□□□□ -1.99
P20040 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.64□□□□□ -1.99
P20040 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.64□□□□□ -1.99
P20040 Gm16129-201ENSMUST00000152628 486 ntBASIC2.64□□□□□ -1.99
P20040 Gm17117-201ENSMUST00000163665 299 ntBASIC2.64□□□□□ -1.99
P20040 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.64□□□□□ -1.99
P20040 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.64□□□□□ -1.99
P20040 Gm26297-201ENSMUST00000179464 132 ntBASIC2.64□□□□□ -1.99
P20040 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
P20040 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.64□□□□□ -1.99
P20040 Gm43104-201ENSMUST00000197234 311 ntBASIC2.64□□□□□ -1.99
P20040 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.64□□□□□ -1.99
P20040 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
P20040 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.64□□□□□ -1.99
P20040 Gm2446-201ENSMUST00000220144 772 ntBASIC2.64□□□□□ -1.99
P20040 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.64□□□□□ -1.99
P20040 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.64□□□□□ -1.99
P20040 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
P20040 Mir465-201ENSMUST00000093563 74 ntBASIC2.64□□□□□ -1.99
P20040 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
P20040 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
P20040 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms