Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm12386-201ENSMUST00000117380 688 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.69□□□□□ -1.82
Col3a1P08121 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.69□□□□□ -1.82
Col3a1P08121 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col3a1P08121 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.69□□□□□ -1.82
Col3a1P08121 Gm25397-201ENSMUST00000176951 92 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm8392-201ENSMUST00000185647 835 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm29216-201ENSMUST00000187117 492 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Trbv24-201ENSMUST00000194614 347 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm43601-201ENSMUST00000196294 945 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm43355-201ENSMUST00000196541 346 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col3a1P08121 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.69□□□□□ -1.82
Col3a1P08121 Gm21112-201ENSMUST00000212224 578 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Gm7760-201ENSMUST00000212265 578 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col3a1P08121 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col3a1P08121 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col3a1P08121 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.69□□□□□ -1.82
Col3a1P08121 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col3a1P08121 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm7916-201ENSMUST00000120325 456 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm14876-201ENSMUST00000120795 327 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm22491-201ENSMUST00000157190 102 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm23957-201ENSMUST00000157209 90 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm22116-201ENSMUST00000158791 141 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col3a1P08121 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col3a1P08121 Gm4761-201ENSMUST00000178086 582 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.68□□□□□ -1.82
Col3a1P08121 Gm27648-201ENSMUST00000184315 107 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm37353-201ENSMUST00000194497 313 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm46233-201ENSMUST00000217831 449 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col3a1P08121 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col3a1P08121 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col3a1P08121 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Col3a1P08121 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.68□□□□□ -1.82
Col3a1P08121 Gm23577-201ENSMUST00000103950 110 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Mir466n-201ENSMUST00000104798 94 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm13087-201ENSMUST00000118298 256 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm11843-201ENSMUST00000118984 425 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm12739-201ENSMUST00000119769 382 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm25898-201ENSMUST00000158303 106 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm24225-201ENSMUST00000158825 98 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm6374-201ENSMUST00000159051 788 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm6395-201ENSMUST00000167639 691 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm29389-201ENSMUST00000191562 352 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm38356-201ENSMUST00000194313 408 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm18340-201ENSMUST00000196342 609 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm19089-201ENSMUST00000197207 613 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm44526-201ENSMUST00000204664 121 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm44910-201ENSMUST00000208451 396 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm45778-201ENSMUST00000211959 153 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm45814-201ENSMUST00000212646 775 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm23628-201ENSMUST00000082464 173 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm22674-201ENSMUST00000104413 131 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Mir291a-201ENSMUST00000104815 82 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm15175-201ENSMUST00000117629 132 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm12370-201ENSMUST00000117809 604 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm14930-201ENSMUST00000118864 652 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm23435-201ENSMUST00000157183 156 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm22141-201ENSMUST00000157403 277 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm21737-201ENSMUST00000178112 664 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm20874-201ENSMUST00000178356 663 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm21744-201ENSMUST00000178403 662 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm4076-201ENSMUST00000179230 965 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm20901-201ENSMUST00000180177 664 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.67□□□□□ -1.82
Col3a1P08121 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col3a1P08121 Gm27013-201ENSMUST00000182441 1024 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm27599-201ENSMUST00000183758 174 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm28967-201ENSMUST00000187351 281 ntBASIC3.67□□□□□ -1.82
Col3a1P08121 Gm28843-201ENSMUST00000189198 678 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms