Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Cldn5O54942 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.26□□□□□ -1.89
Cldn5O54942 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Cldn5O54942 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm23175-201ENSMUST00000104371 132 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm14981-201ENSMUST00000117325 943 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm14119-201ENSMUST00000119511 235 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm12095-201ENSMUST00000121962 816 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.25□□□□□ -1.89
Cldn5O54942 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm22187-201ENSMUST00000157819 129 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm24190-201ENSMUST00000157976 216 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm25066-201ENSMUST00000158145 123 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm8676-201ENSMUST00000184206 637 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm28781-201ENSMUST00000185760 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm29574-201ENSMUST00000186226 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm28828-201ENSMUST00000186601 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm29307-201ENSMUST00000187367 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm29339-201ENSMUST00000189613 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm29330-201ENSMUST00000190032 699 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm28159-201ENSMUST00000190296 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm28098-201ENSMUST00000191361 699 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm29407-201ENSMUST00000191468 696 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.25□□□□□ -1.89
Cldn5O54942 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm4921-201ENSMUST00000219804 992 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Cldn5O54942 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Cldn5O54942 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Cldn5O54942 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.25□□□□□ -1.89
Cldn5O54942 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn5O54942 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm26002-201ENSMUST00000101915 107 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm11876-201ENSMUST00000120002 269 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm13751-201ENSMUST00000120280 752 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm24836-201ENSMUST00000122609 108 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm22322-201ENSMUST00000157151 111 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm25490-201ENSMUST00000158734 130 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm6374-201ENSMUST00000159051 788 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm4540-201ENSMUST00000170669 429 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Mir5136-201ENSMUST00000175573 76 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm21894-201ENSMUST00000179631 546 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm27648-201ENSMUST00000184315 107 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Mir6383-201ENSMUST00000184545 116 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Mir6372-201ENSMUST00000185114 109 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm37828-201ENSMUST00000192496 432 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm35931-201ENSMUST00000203931 448 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm18488-201ENSMUST00000215082 364 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm32300-201ENSMUST00000221735 515 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm22970-201ENSMUST00000083304 186 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn5O54942 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn5O54942 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.24□□□□□ -1.89
Cldn5O54942 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn5O54942 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cldn5O54942 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Cldn5O54942 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn5O54942 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn5O54942 Gm12891-201ENSMUST00000119358 240 ntBASIC3.23□□□□□ -1.89
Cldn5O54942 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.23□□□□□ -1.89
Cldn5O54942 Gm14578-201ENSMUST00000122166 391 ntBASIC3.23□□□□□ -1.89
Cldn5O54942 Gm24534-201ENSMUST00000157949 291 ntBASIC3.23□□□□□ -1.89
Cldn5O54942 Gm25413-201ENSMUST00000158544 312 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms