Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm43600-201ENSMUST00000202134 223 ntBASIC1.95□□□□□ -2.1
Hmgb3O54879 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.95□□□□□ -2.1
Hmgb3O54879 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
Hmgb3O54879 Gm46389-201ENSMUST00000223199 392 ntBASIC1.95□□□□□ -2.1
Hmgb3O54879 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC1.95□□□□□ -2.1
Hmgb3O54879 AC130477.2-201ENSMUST00000228158 274 ntBASIC1.95□□□□□ -2.1
Hmgb3O54879 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Hmgb3O54879 Gm23975-201ENSMUST00000082685 106 ntBASIC1.95□□□□□ -2.1
Hmgb3O54879 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.95□□□□□ -2.1
Hmgb3O54879 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Hmgb3O54879 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm23128-201ENSMUST00000104257 132 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Mup-ps13-201ENSMUST00000120662 545 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm25270-201ENSMUST00000122606 138 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm2830-201ENSMUST00000140330 385 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC1.94□□□□□ -2.1
Hmgb3O54879 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm26280-201ENSMUST00000157096 101 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm24210-201ENSMUST00000158263 133 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm24769-201ENSMUST00000158506 129 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm24771-201ENSMUST00000158508 137 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm24875-201ENSMUST00000158888 104 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm16561-201ENSMUST00000163001 192 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm17187-201ENSMUST00000164622 410 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm8532-201ENSMUST00000179174 461 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm25528-201ENSMUST00000180264 132 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Mir6402-201ENSMUST00000183406 80 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm27869-201ENSMUST00000184327 122 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm28951-201ENSMUST00000190742 313 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm32033-201ENSMUST00000193483 339 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm23128-202ENSMUST00000196578 133 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm19089-201ENSMUST00000197207 613 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Hmgb3O54879 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC144783.2-201ENSMUST00000219089 195 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm9370-201ENSMUST00000222787 609 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC150560.3-201ENSMUST00000227442 455 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC164883.9-201ENSMUST00000228042 399 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm9762-201ENSMUST00000036976 444 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Gm43663-201ENSMUST00000198643 1505 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC1.94□□□□□ -2.1
Hmgb3O54879 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Hmgb3O54879 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.93□□□□□ -2.1
Hmgb3O54879 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Hmgb3O54879 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm15488-201ENSMUST00000121682 670 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm24553-201ENSMUST00000158653 131 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm23268-201ENSMUST00000175494 78 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Mir6379-201ENSMUST00000183392 115 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm28788-201ENSMUST00000189717 375 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm29558-201ENSMUST00000190134 375 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm37119-201ENSMUST00000195691 389 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm17935-201ENSMUST00000196649 772 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm18748-201ENSMUST00000198507 622 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm44849-201ENSMUST00000207595 484 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm45409-201ENSMUST00000211486 252 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.93□□□□□ -2.1
Hmgb3O54879 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Hmgb3O54879 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Hmgb3O54879 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Hmgb3O54879 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm24670-201ENSMUST00000104154 132 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm25308-201ENSMUST00000104171 158 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm13046-201ENSMUST00000117391 501 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm14652-201ENSMUST00000118479 235 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm14352-201ENSMUST00000119250 449 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm24212-201ENSMUST00000158258 132 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm19203-201ENSMUST00000174049 939 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm18595-201ENSMUST00000175736 1068 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm43765-201ENSMUST00000196303 893 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm42465-201ENSMUST00000197036 492 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm34314-201ENSMUST00000203622 367 ntBASIC1.92□□□□□ -2.1
Hmgb3O54879 Gm45049-201ENSMUST00000207586 591 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms