Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm21726-201ENSMUST00000179654 392 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.52□□□□□ -1.85
Clk3O35492 Mir6341-201ENSMUST00000183490 121 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Mir6372-201ENSMUST00000185114 109 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.52□□□□□ -1.85
Clk3O35492 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.52□□□□□ -1.85
Clk3O35492 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Clk3O35492 Gm23645-201ENSMUST00000083228 108 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Clk3O35492 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.52□□□□□ -1.85
Clk3O35492 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Mir669o-201ENSMUST00000103898 96 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm23133-201ENSMUST00000104255 135 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm13046-201ENSMUST00000117391 501 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm12156-201ENSMUST00000119188 554 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 Gm23098-201ENSMUST00000157552 299 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm10357-201ENSMUST00000159886 264 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm24713-201ENSMUST00000178850 107 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm22631-201ENSMUST00000179656 94 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm25448-201ENSMUST00000180065 107 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm23186-201ENSMUST00000180078 107 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm26746-201ENSMUST00000181722 487 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm27445-201ENSMUST00000184484 72 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm28211-201ENSMUST00000190920 315 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm37568-201ENSMUST00000191755 364 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm42453-201ENSMUST00000200477 409 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm42665-201ENSMUST00000202100 586 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm45539-201ENSMUST00000210313 428 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.51□□□□□ -1.85
Clk3O35492 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Clk3O35492 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.51□□□□□ -1.85
Clk3O35492 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clk3O35492 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Clk3O35492 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Clk3O35492 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm13567-201ENSMUST00000118026 247 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm11982-201ENSMUST00000121480 314 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.5□□□□□ -1.85
Clk3O35492 Gm9225-201ENSMUST00000121921 836 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Clk3O35492 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.5□□□□□ -1.85
Clk3O35492 Gm24784-201ENSMUST00000157640 62 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm23112-201ENSMUST00000158606 125 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm24876-201ENSMUST00000158780 92 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Nron-204ENSMUST00000158971 370 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.5□□□□□ -1.85
Clk3O35492 Gm24811-201ENSMUST00000175313 100 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.5□□□□□ -1.85
Clk3O35492 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.5□□□□□ -1.85
Clk3O35492 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm27317-201ENSMUST00000183533 95 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm8151-201ENSMUST00000184817 871 ntBASIC3.5□□□□□ -1.85
Clk3O35492 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Clk3O35492 Gm19089-201ENSMUST00000197207 613 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm45438-201ENSMUST00000210242 564 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.5□□□□□ -1.85
Clk3O35492 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.5□□□□□ -1.85
Clk3O35492 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.5□□□□□ -1.85
Clk3O35492 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.5□□□□□ -1.85
Clk3O35492 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.5□□□□□ -1.85
Clk3O35492 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Clk3O35492 AF357341-201ENSMUST00000083088 75 ntBASIC3.5□□□□□ -1.85
Clk3O35492 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Clk3O35492 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clk3O35492 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clk3O35492 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clk3O35492 Gm15231-201ENSMUST00000119174 447 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm14352-201ENSMUST00000119250 449 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm11600-201ENSMUST00000119592 240 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm14848-201ENSMUST00000121850 467 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.49□□□□□ -1.85
Clk3O35492 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.49□□□□□ -1.85
Clk3O35492 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.49□□□□□ -1.85
Clk3O35492 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Clk3O35492 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Clk3O35492 Gm23123-201ENSMUST00000157648 144 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm24727-201ENSMUST00000158231 144 ntBASIC3.49□□□□□ -1.85
Clk3O35492 Gm26362-201ENSMUST00000158865 315 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms