Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm21827-201ENSMUST00000178247 423 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm20773-201ENSMUST00000178940 681 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm27957-201ENSMUST00000184054 127 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm45232-201ENSMUST00000207811 162 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm45439-201ENSMUST00000211723 359 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm18488-201ENSMUST00000215082 364 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm30155-201ENSMUST00000223458 339 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm23615-201ENSMUST00000082602 65 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Shank1D3YZU1 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.02□□□□□ -1.93
Shank1D3YZU1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm25553-201ENSMUST00000158076 79 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm18520-201ENSMUST00000174783 658 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm24968-201ENSMUST00000179817 107 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Mir6541-201ENSMUST00000183649 110 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm42818-201ENSMUST00000198869 987 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm44223-201ENSMUST00000204854 114 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm45031-201ENSMUST00000206800 288 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm45049-201ENSMUST00000207586 591 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm45316-201ENSMUST00000210128 162 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm18160-201ENSMUST00000214279 827 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm25560-201ENSMUST00000104606 176 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm3940-201ENSMUST00000105087 432 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm23463-201ENSMUST00000122468 99 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm22236-201ENSMUST00000157093 106 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm26914-201ENSMUST00000182262 223 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm37869-201ENSMUST00000193385 595 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Shank1D3YZU1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.01□□□□□ -1.93
Shank1D3YZU1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Shank1D3YZU1 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Shank1D3YZU1 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm25848-201ENSMUST00000116790 144 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm11490-201ENSMUST00000118128 272 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm11219-201ENSMUST00000118565 358 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm14731-201ENSMUST00000119216 376 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm14655-201ENSMUST00000120124 578 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm2005-201ENSMUST00000120759 542 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3□□□□□ -1.93
Shank1D3YZU1 Gm14411-201ENSMUST00000121798 914 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm25163-201ENSMUST00000158905 104 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm14527-201ENSMUST00000179300 639 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm21729-201ENSMUST00000180058 664 ntBASIC3□□□□□ -1.93
Shank1D3YZU1 Gm21853-201ENSMUST00000180071 664 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms