Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm23577-201ENSMUST00000103950 110 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm11221-201ENSMUST00000117230 597 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm9009-201ENSMUST00000117321 326 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm14554-201ENSMUST00000119548 661 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm23463-201ENSMUST00000122468 99 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm23865-201ENSMUST00000157723 97 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm24240-201ENSMUST00000157785 135 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm16289-201ENSMUST00000162079 183 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm23287-201ENSMUST00000179427 116 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm23143-201ENSMUST00000180137 116 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm7675-201ENSMUST00000208828 686 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm21089-201ENSMUST00000215843 325 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm18026-201ENSMUST00000222789 727 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm24871-201ENSMUST00000083099 116 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm23847-201ENSMUST00000083829 110 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm21286-201ENSMUST00000098035 545 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.37□□□□□ -2.03
Trav12-2A0N8N6 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm13541-201ENSMUST00000119519 283 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm14069-201ENSMUST00000120815 229 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm22792-201ENSMUST00000157225 133 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Mir6405-201ENSMUST00000184584 124 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm43228-201ENSMUST00000200735 264 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm45530-201ENSMUST00000211658 225 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm23615-201ENSMUST00000082602 65 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Mir323-201ENSMUST00000083683 86 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav12-2A0N8N6 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Snrpert-201ENSMUST00000121967 279 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm23473-201ENSMUST00000158883 116 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm7858-201ENSMUST00000190177 622 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm37616-201ENSMUST00000193974 322 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm37732-201ENSMUST00000194377 316 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm45400-201ENSMUST00000211603 653 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm18346-201ENSMUST00000216782 325 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.35□□□□□ -2.03
Trav12-2A0N8N6 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.34□□□□□ -2.03
Trav12-2A0N8N6 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms